RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 COQ4Q9Y3A0 265 aa12.95□□□□□ -0.34
POLR2J3-210ENST00000504677 LRRC53A6NM62 1247 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 B4GALT5O43286 388 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 FAM189A1O60320 539 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 ZC3H11AO75152 810 aaKnown RBP eCLIP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 IL18RAPO95256 599 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 DLATP10515 647 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 HARSP12081 509 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 DARSP14868 501 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 SLC9A1P19634 815 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 ACOT2P49753 483 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 CRYBB1P53674 252 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 KIZQ2M2Z5 673 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 FAM47CQ5HY64 1035 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 SFMBT2Q5VUG0 894 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 SMYD5Q6GMV2 418 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 DPY19L2P1Q6NXN4 242 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 RPAINQ86UA6 219 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 FBXL13Q8NEE6 735 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 DNAJB3Q8WWF6 145 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 ZNF668Q96K58 619 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 SPAG5Q96R06 1193 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 SEZ6LQ9BYH1 1024 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 TMEM117Q9H0C3 514 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 PDZD7Q9H5P4 517 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 SIX2Q9NPC8 291 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 CPSF3Q9UKF6 684 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
POLR2J3-210ENST00000504677 A0A1B0GUA9 196 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 SOWAHDA6NJG2 315 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 CLTAP09496 248 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 CCDC175P0C221 793 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 IQCF3P0C7M6 154 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 CCDC172P0C7W6 258 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 ARF4P18085 180 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 TNNI1P19237 187 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 EIF4BP23588 611 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 ANXA13P27216 316 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 MRPS6P82932 125 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 HIC1Q14526 733 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 ASIC2Q16515 512 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 NOTUMQ6P988 496 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 C15orf39Q6ZRI6 1047 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 CATSPER4Q7RTX7 472 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 SERINC5Q86VE9 423 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 CCAR2Q8N163 923 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 PPP1R16BQ96T49 567 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 AIPL1Q9NZN9 384 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 FHOD1Q9Y613 1164 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 BZW2Q9Y6E2 419 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
POLR2J3-210ENST00000504677 TRIP12Q14669 1992 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 SSU72P8A0A1W2PR75 194 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 KIF2AO00139 706 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 CAND2O75155 1236 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 TUBB4AP04350 444 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 SERPING1P05155 500 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 ACTN1P12814 892 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 FERP16591 822 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 CLCN1P35523 988 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 STAT1P42224 750 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 ACLYP53396 1101 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 JAM2P57087 298 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 RAPGEF1Q13905 1077 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 SNX17Q15036 470 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 ZACNQ401N2 412 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 EEF1DP3Q658K8 133 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 E4F1Q66K89 784 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 GDF6Q6KF10 455 aaPredicted RBP12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 SV2AQ7L0J3 742 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 ENOSF1Q7L5Y1 443 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 CD302Q8IX05 232 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 LMO3Q8TAP4 145 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 NT5C1BQ96P26 610 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 OSMRQ99650 979 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 STK33Q9BYT3 514 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 PDE11AQ9HCR9 933 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 RAB20Q9NX57 234 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 WBP1LQ9NX94 342 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 PTPN22Q9Y2R2 807 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 PPP2R2CQ9Y2T4 447 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 TRPV2Q9Y5S1 764 aa12.92□□□□□ -0.34
POLR2J3-210ENST00000504677 KBTBD13C9JR72 458 aa12.91□□□□□ -0.34
POLR2J3-210ENST00000504677 B4GALT4O60513 344 aa12.91□□□□□ -0.34
POLR2J3-210ENST00000504677 NDUFA10O95299 355 aa12.91□□□□□ -0.34
POLR2J3-210ENST00000504677 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms