RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 VSTM1Q6UX27 236 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 KRT26Q7Z3Y9 468 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CYP2U1Q7Z449 544 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SGMS1Q86VZ5 419 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PDSS2Q86YH6 399 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 C2CD5Q86YS7 1000 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 GRAMD1CQ8IYS0 662 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SLC7A5P1Q8MH63 180 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SYCE1Q8N0S2 351 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 MARVELD2Q8N4S9 558 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ENAHQ8N8S7 591 aaPredicted RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SPERTQ8NA61 448 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SVIPQ8NHG7 77 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CCDC110Q8TBZ0 833 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CHPT1Q8WUD6 406 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 C7orf43Q8WVR3 580 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ESR2Q92731 530 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 BORCS5Q969J3 196 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 RELTQ969Z4 430 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 NMD3Q96D46 503 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 NSL1Q96IY1 281 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CDK5RAP3Q96JB5 506 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 TGS1Q96RS0 853 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 OLFM1Q99784 485 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 NEURL2Q9BR09 285 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 STK33Q9BYT3 514 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 OSBPL6Q9BZF3 934 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CCDC8Q9H0W5 538 aaPredicted RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CCDC68Q9H2F9 335 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ZNF696Q9H7X3 374 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 MAGEF1Q9HAY2 307 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CASS4Q9NQ75 786 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 TBC1D23Q9NUY8 699 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 NKIRAS1Q9NYS0 192 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 IL20Q9NYY1 176 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 CLIC5Q9NZA1 410 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 TCEAL9Q9UHQ7 104 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SALL4Q9UJQ4 1053 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 MTUS1Q9ULD2 1270 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 ANGEL1Q9UNK9 670 aaKnown RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 FAF1Q9UNN5 650 aaPredicted RBP6.35□□□□□ -1.39
LINC01340-201ENST00000504012 PRELID1Q9Y255 219 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 B3GNT3Q9Y2A9 372 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SIK3Q9Y2K2 1263 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 TRIM17Q9Y577 477 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 COL4A3BPQ9Y5P4 624 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 SLIT1O75093 1534 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 MYH1P12882 1939 aa6.35□□□□□ -1.39
LINC01340-201ENST00000504012 MYO5BQ9ULV0 1848 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 XDHP47989 1333 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 TMEM120BA0PK00 339 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 TMEM114B3SHH9 223 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 ERVV-2B6SEH9 535 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 H3BNX3 289 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 BOLA2-SMG1P6H3BVE0 249 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 PFDN6O15212 129 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 ALOX15BO15296 676 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 RNF113AO15541 343 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 RNMTO43148 476 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 ADCY3O60266 1144 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 PDE8AO60658 829 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 RNASEH1O60930 286 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 TBCAO75347 108 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 KRT36O76013 467 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 RECKO95980 971 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 CLPTM1O96005 669 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 C7P10643 843 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 ETS2P15036 469 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 VCLP18206 1134 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 STX2P32856 288 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 S100A5P33763 92 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 SERPINB6P35237 376 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 GRIA2P42262 883 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 AFMP43652 599 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 PHKA2P46019 1235 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 CDK9P50750 372 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 CYP4A11Q02928 519 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 EHHADHQ08426 723 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 HSPA14Q0VDF9 509 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 TEFQ10587 303 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 KCNMA1Q12791 1236 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 SLC29A2Q14542 456 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 TGFBIQ15582 683 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 SLC18A3Q16572 532 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 CTC1Q2NKJ3 1217 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 ANKRD20A4Q4UJ75 823 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 HERC4Q5GLZ8 1057 aaPredicted RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 MIIPQ5JXC2 388 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 HGSNATQ68CP4 663 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 TYW1BQ6NUM6 668 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 UGT2A3Q6UWM9 527 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 KYAT3Q6YP21 454 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 RBM44Q6ZP01 1051 aaKnown RBP6.34□□□□□ -1.39
LINC01340-201ENST00000504012 C3orf67Q6ZVT6 689 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 VPS36Q86VN1 386 aa6.34□□□□□ -1.39
LINC01340-201ENST00000504012 NT5DC4Q86YG4 428 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms