RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 XBP1P17861 261 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RAB27AP51159 221 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 HIRAP54198 1017 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 BTKQ06187 659 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 CHRNDQ07001 517 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PABPC4Q13310 644 aaKnown RBP eCLIP3□□□□□ -1.93
NEDD4-204ENST00000503468 SPIDRQ14159 915 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 POSTNQ15063 836 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 LONRF3Q496Y0 759 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ARSHQ5FYA8 562 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 C6orf89Q6UWU4 347 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PLPPR4Q7Z2D5 763 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ANKS1BQ7Z6G8 1248 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PLPP6Q8IY26 295 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MB21D1Q8N884 522 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 FANCBQ8NB91 859 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 OR52E4Q8NGH9 312 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 GRIN3AQ8TCU5 1115 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SLC35C1Q96A29 364 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NGLY1Q96IV0 654 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 UBXN10Q96LJ8 280 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NEK1Q96PY6 1258 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM9Q9C026 710 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PCDH18Q9HCL0 1135 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RBM8AQ9Y5S9 174 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 NR2E3Q9Y5X4 410 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ARHGAP10A1A4S6 786 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 IQCA1LA6NCM1 817 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 N4BP3O15049 544 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SLC16A3O15427 465 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 ZBED4O75132 1171 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RHOXF2BP0C7M4 288 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PRR29P0C7W0 189 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ATP2A2P16615 1042 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 EEF1GP26641 437 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 GNAQP50148 359 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PDE1BQ01064 536 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ALCAMQ13740 583 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ADRM1Q16186 407 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PARP6Q2NL67 630 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 CWF19L2Q2TBE0 894 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 PRSS55Q6UWB4 352 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 TAOK1Q7L7X3 1001 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM42Q8IWZ5 723 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SPATA5Q8NB90 893 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 JARID2Q92833 1246 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 GPRASP2Q96D09 838 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TOX2Q96NM4 488 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NR1H4Q96RI1 486 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 SLC9A7Q96T83 725 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RHOXF2Q9BQY4 288 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SELENOOQ9BVL4 669 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ANKZF1Q9H8Y5 726 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TRPV5Q9NQA5 729 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ZSWIM5Q9P217 1185 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PPIL1Q9Y3C6 166 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ADGRA3Q8IWK6 1321 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 UNC79Q9P2D8 2635 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 CCT8L1PA6NM43 557 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 H0YGN5 161 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 EML1O00423 815 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 AREL1O15033 823 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MAGEB2O15479 319 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MFAP3LO75121 409 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 KCNA2P16389 499 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MAN1A1P33908 653 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TECP42680 631 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 EPC2Q52LR7 807 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TBC1D9BQ66K14 1250 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 DPY19L2Q6NUT2 758 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 GPR153Q6NV75 609 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 METTL2BQ6P1Q9 378 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 ANKRD13AQ8IZ07 590 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF473Q8WTR7 871 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 CHMP6Q96FZ7 201 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 WDR24Q96S15 920 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SARGQ9BW04 601 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 DCLRE1BQ9H816 532 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SEMA5BQ9P283 1151 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 FBXO10Q9UK96 956 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 AGO1Q9UL18 857 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHAC2Q9Y5I4 1007 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NFS1Q9Y697 457 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NCOR1O75376 2440 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 A6NHS1 94 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MSCO60682 206 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 CTNND1O60716 968 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 ARIH2O95376 493 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 GNA14O95837 355 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 GNRH1P01148 92 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 KCNE1P15382 129 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 POLD1P28340 1107 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NOS2P35228 1153 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PSMC4P43686 418 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 DNM2P50570 870 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ARHGAP4P98171 946 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TAF11Q15544 211 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 GRIK5Q16478 980 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ODF2Q5BJF6 829 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PPP2R2DQ66LE6 453 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms