RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ASGR2P07307 311 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 RPL17P18621 184 aaKnown RBP17.91■□□□□ 0.46
SCLT1-204ENST00000503215 NPTX2P47972 431 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 PEX3P56589 373 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-204ENST00000503215 PPP2R5AQ15172 486 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 NAB2Q15742 525 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 RINT1Q6NUQ1 792 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 C1orf186Q6ZWK4 172 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 TAS1R3Q7RTX0 852 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 GPR149Q86SP6 731 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 GLYCTKQ8IVS8 523 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 PBXIP1Q96AQ6 731 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 ASIC4Q96FT7 647 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 MAN1C1Q9NR34 630 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 LIMD1Q9UGP4 676 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 ADAM28Q9UKQ2 775 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 WDFY4Q6ZS81 3184 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 CCDC169A6NNP5 214 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 H3BQV1 296 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 LAD1O00515 517 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 NR1I2O75469 434 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 TUSC3Q13454 348 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 RILPL1Q5EBL4 403 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 ATF7IP2Q5U623 682 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 PRSS55Q6UWB4 352 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-204ENST00000503215 PALB2Q86YC2 1186 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 KREMEN2Q8NCW0 462 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 RIN2Q8WYP3 895 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-204ENST00000503215 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 SFXN1Q9H9B4 322 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 STK39Q9UEW8 545 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 NR2E1Q9Y466 385 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 KIF3AQ9Y496 699 aa17.91■□□□□ 0.46
SCLT1-204ENST00000503215 VWA3AA6NCI4 1184 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 K7ERI5 159 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 TADA2AO75478 443 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 RFPL2O75678 378 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 KIF4AO95239 1232 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 EFNA5P52803 228 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 SIGLEC14Q08ET2 396 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 RAD51AP2Q09MP3 1159 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
SCLT1-204ENST00000503215 GLRA4Q5JXX5 417 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 RTP2Q5QGT7 225 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 IER5LQ5T953 404 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 BMP8AQ7Z5Y6 402 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 CEP120Q8N960 986 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 SMC3Q9UQE7 1217 aa17.9■□□□□ 0.46
SCLT1-204ENST00000503215 ZMYM2Q9UBW7 1377 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 PLXNA3P51805 1871 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 BRD1O95696 1058 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 PDGFBP01127 241 aaPredicted RBP17.89■□□□□ 0.45
SCLT1-204ENST00000503215 THP07101 528 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 ADH1AP07327 375 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 USP41Q3LFD5 358 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 ZBTB33Q86T24 672 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 LRRC15Q8TF66 581 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 MFSD14AQ96MC6 490 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 ACO2Q99798 780 aaKnown RBP17.89■□□□□ 0.45
SCLT1-204ENST00000503215 ADPGKQ9BRR6 497 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 TARS2Q9BW92 718 aaKnown RBP17.89■□□□□ 0.45
SCLT1-204ENST00000503215 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
SCLT1-204ENST00000503215 PTPRHQ9HD43 1115 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 SSX2IPQ9Y2D8 614 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 STK24Q9Y6E0 443 aa17.89■□□□□ 0.45
SCLT1-204ENST00000503215 NPHP3-ACAD11A0A0J9YXS1 232 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 CCDC195A0A1B0GUA6 201 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 SLC16A4O15374 487 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 GLUD1P00367 558 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 OSTNP61366 133 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 HYIQ5T013 277 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 FAM171A1Q5VUB5 890 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
SCLT1-204ENST00000503215 CD300LGQ6UXG3 332 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 TDRD5Q8NAT2 981 aaKnown RBP17.88■□□□□ 0.45
SCLT1-204ENST00000503215 ZBTB45Q96K62 511 aaPredicted RBP17.88■□□□□ 0.45
SCLT1-204ENST00000503215 CDT1Q9H211 546 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 ARHGAP28Q9P2N2 729 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 TNFSF13BQ9Y275 285 aa17.88■□□□□ 0.45
SCLT1-204ENST00000503215 C2orf16Q68DN1 1984 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 ABLIM1O14639 778 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 MEFVO15553 781 aaPredicted RBP17.87■□□□□ 0.45
SCLT1-204ENST00000503215 ADAM12O43184 909 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 TGM5O43548 720 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 N4BP1O75113 896 aaKnown RBP17.87■□□□□ 0.45
SCLT1-204ENST00000503215 VCPP55072 806 aaKnown RBP17.87■□□□□ 0.45
SCLT1-204ENST00000503215 GRIN1Q05586 938 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 DCAF4L1Q3SXM0 396 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 CEP57Q86XR8 500 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 ZDHHC14Q8IZN3 488 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 ZNF707Q96C28 371 aaPredicted RBP17.87■□□□□ 0.45
SCLT1-204ENST00000503215 PPP1R10Q96QC0 940 aaKnown RBP17.87■□□□□ 0.45
SCLT1-204ENST00000503215 TMEM134Q9H6X4 195 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 GOLGA2P5Q9HBQ8 144 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 KMT5AQ9NQR1 393 aa17.87■□□□□ 0.45
SCLT1-204ENST00000503215 MCM2P49736 904 aa17.86■□□□□ 0.45
SCLT1-204ENST00000503215 SLC12A3P55017 1021 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms