RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TULP1O00294 542 aaPredicted RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 VCAM1P19320 739 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 ITIH4Q14624 930 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 PPP2R5EQ16537 467 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 INTS9Q9NV88 658 aaKnown RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 BAIAP2L1Q9UHR4 511 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 CEP83Q9Y592 693 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 EMSYQ7Z589 1322 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 FOXN3O00409 490 aaPredicted RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 DHX15O43143 795 aaKnown RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 TBC1D12O60347 775 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 P4HBP07237 508 aaKnown RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 ALAS1P13196 640 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 TNFAIP3P21580 790 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 SLC8A1P32418 973 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 SLCO1A2P46721 670 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 RPL21P46778 160 aaKnown RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 ZSWIM2Q8NEG5 633 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 EPS8L3Q8TE67 593 aaKnown RBP17.6■□□□□ 0.41
COL6A1-206ENST00000498614 TBC1D31Q96DN5 1066 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 CBWD1Q9BRT8 395 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 GGA3Q9NZ52 723 aa17.6■□□□□ 0.41
COL6A1-206ENST00000498614 VIMP08670 466 aaKnown RBP17.59■□□□□ 0.41
COL6A1-206ENST00000498614 IFNAR2P48551 515 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 DRG2P55039 364 aaKnown RBP17.59■□□□□ 0.41
COL6A1-206ENST00000498614 FAM133BQ5BKY9 247 aaKnown RBP17.59■□□□□ 0.41
COL6A1-206ENST00000498614 TLDC1Q6P9B6 456 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 SLC9A9Q8IVB4 645 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 CCDC63Q8NA47 563 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 LMO3Q8TAP4 145 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 CLEC4DQ8WXI8 215 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 DEFB129Q9H1M3 183 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 LARSQ9P2J5 1176 aaKnown RBP17.59■□□□□ 0.41
COL6A1-206ENST00000498614 ASNSP08243 561 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 GSTA1P08263 222 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 FGFR4P22455 802 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 MARCKSL1P49006 195 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 TKFCQ3LXA3 575 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 ACCSLQ4AC99 568 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 ZDHHC14Q8IZN3 488 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 PRELID2Q8N945 189 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 KRT35Q92764 455 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 ATP6V0A4Q9HBG4 840 aa17.59■□□□□ 0.41
COL6A1-206ENST00000498614 UBE2TQ9NPD8 197 aaPredicted RBP17.59■□□□□ 0.41
COL6A1-206ENST00000498614 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■■■ 149.1
COL6A1-206ENST00000498614 KIF1CO43896 1103 aaKnown RBP17.58■□□□□ 0.41
COL6A1-206ENST00000498614 PHF2O75151 1096 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 AGTP01019 485 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 BCRP11274 1271 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 GCLMP48507 274 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 PSEN1P49768 467 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 RARRES1P49788 294 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.41
COL6A1-206ENST00000498614 PPP3CAQ08209 521 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 SPP2Q13103 211 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 TTC27Q6P3X3 843 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 ARHGEF19Q8IW93 802 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 RAVER2Q9HCJ3 691 aaKnown RBP17.58■□□□□ 0.41
COL6A1-206ENST00000498614 AGO4Q9HCK5 861 aaKnown RBP17.58■□□□□ 0.41
COL6A1-206ENST00000498614 ABCF3Q9NUQ8 709 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 SAMD15Q9P1V8 674 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 RASAL2Q9UJF2 1139 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 ALG6Q9Y672 507 aa17.58■□□□□ 0.41
COL6A1-206ENST00000498614 EIF2AK2P19525 551 aaKnown RBP17.58■□□□□ 0.4
COL6A1-206ENST00000498614 C6orf118Q5T5N4 469 aa17.58■□□□□ 0.4
COL6A1-206ENST00000498614 TRPM8Q7Z2W7 1104 aa17.58■□□□□ 0.4
COL6A1-206ENST00000498614 TBC1D1Q86TI0 1168 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-206ENST00000498614 MIEF2Q96C03 454 aa17.58■□□□□ 0.4
COL6A1-206ENST00000498614 AGAP1Q9UPQ3 857 aa17.58■□□□□ 0.4
COL6A1-206ENST00000498614 POLR2AP24928 1970 aaKnown RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 TMEM110-MUSTN1A8MSY1 372 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 CLTAP09496 248 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 VAMP7P51809 220 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 ADCY2Q08462 1091 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 MTMR1Q13613 665 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 CCDC38Q502W7 563 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 NBPF12Q5TAG4 269 aaPredicted RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 FAM83AQ86UY5 434 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 ACCSQ96QU6 501 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 CCDC134Q9H6E4 229 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 TMEM206Q9H813 350 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 GPRC5CQ9NQ84 441 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 DBR1Q9UK59 544 aaKnown RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 ANKRD62A6NC57 917 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 RPSAP08865 295 aaKnown RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 QARSP47897 775 aaKnown RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 KIF22Q14807 665 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 UGCGQ16739 394 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 FKBP1CQ5VVH2 108 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 INTS8Q75QN2 995 aaKnown RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 PNMA8AQ86V59 439 aaPredicted RBP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 CCDC113Q9H0I3 377 aa17.57■□□□□ 0.4
COL6A1-206ENST00000498614 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL6A1-206ENST00000498614 PCDHA3Q9Y5H8 950 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms