RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 FBXO22Q8NEZ5 403 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 URGCPQ8TCY9 931 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 GDPD5Q8WTR4 605 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 SCFD1Q8WVM8 642 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 MRPL9Q9BYD2 267 aaKnown RBP21.25■□□□□ 0.99
HDAC4-212ENST00000495497 EXOC7Q9UPT5 735 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 MEFVO15553 781 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-212ENST00000495497 DDHD2O94830 711 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 ADSSP30520 456 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 TNFSF9P41273 254 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 RNASELQ05823 741 aaKnown RBP21.24■□□□□ 0.99
HDAC4-212ENST00000495497 STXBP4Q6ZWJ1 553 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 COLGALT1Q8NBJ5 622 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 KIAA0895Q8NCT3 520 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 ZNF507Q8TCN5 953 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 MYLIPQ8WY64 445 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 CCDC34Q96HJ3 373 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 CDX2Q99626 313 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-212ENST00000495497 MSTO1Q9BUK6 570 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 CCDC94Q9BW85 323 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-212ENST00000495497 NRDE2Q9H7Z3 1164 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 DNAJB4Q9UDY4 337 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 PLAGL2Q9UPG8 496 aa21.24■□□□□ 0.99
HDAC4-212ENST00000495497 CDH23Q9H251 3354 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 CHD7Q9P2D1 2997 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 A0A0B4J269 797 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 NT5C1B-RDH14C9J2C7 533 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 INPPL1O15357 1258 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 EIF3DO15371 548 aaKnown RBP eCLIP21.23■□□□□ 0.99
HDAC4-212ENST00000495497 ZC3H11AO75152 810 aaKnown RBP eCLIP21.23■□□□□ 0.99
HDAC4-212ENST00000495497 ZSWIM2Q8NEG5 633 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 SAMD11Q96NU1 681 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 ACAP3Q96P50 834 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 TMEM206Q9H813 350 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 STYXL1Q9Y6J8 313 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 ZMYM2Q9UBW7 1377 aa21.23■□□□□ 0.99
HDAC4-212ENST00000495497 PTGESO14684 152 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 FAM189A1O60320 539 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 RHOBTB3O94955 611 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 BCAR1P56945 870 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 PSMD2Q13200 908 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 GPM6BQ13491 265 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 ADGRE1Q14246 886 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 GLRA4Q5JXX5 417 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 KLHL23Q8NBE8 558 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 POMGNT1Q8WZA1 660 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 RPS6KC1Q96S38 1066 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 PCIF1Q9H4Z3 704 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 KANSL3Q9P2N6 904 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 RWDD3Q9Y3V2 267 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 PCDHA5Q9Y5H7 936 aa21.22■□□□□ 0.99
HDAC4-212ENST00000495497 C5orf67F2Z3F1 127 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 OGTO15294 1046 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 LPXNO60711 386 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 LAG3P18627 525 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 YARSP54577 528 aaKnown RBP21.21■□□□□ 0.99
HDAC4-212ENST00000495497 SLFN12LQ6IEE8 588 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 KCNT2Q6UVM3 1135 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 CCDC47Q96A33 483 aaKnown RBP21.21■□□□□ 0.99
HDAC4-212ENST00000495497 SAAL1Q96ER3 474 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 FAM193BQ96PV7 902 aaPredicted RBP21.21■□□□□ 0.99
HDAC4-212ENST00000495497 CBWD1Q9BRT8 395 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 ALG13Q9NP73 1137 aaKnown RBP21.21■□□□□ 0.99
HDAC4-212ENST00000495497 AAASQ9NRG9 546 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 CACNG4Q9UBN1 327 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 AGO2Q9UKV8 859 aaKnown RBP21.21■□□□□ 0.99
HDAC4-212ENST00000495497 PCDHB12Q9Y5F1 795 aa21.21■□□□□ 0.99
HDAC4-212ENST00000495497 H3BNC9 293 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 TGFB1I1O43294 461 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 CSPG5O95196 566 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 ITGB1P05556 798 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 CLTAP09496 248 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 CXCL8P10145 99 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 SLC11A1P49279 550 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 ACOT2P49753 483 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 KCNB1Q14721 858 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 CAMK4Q16566 473 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 BMT2Q1RMZ1 405 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 SLC10A6Q3KNW5 377 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 ALKAL1Q6UXT8 129 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 SMYD4Q8IYR2 804 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-212ENST00000495497 RSPH1Q8WYR4 309 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 SMARCE1Q969G3 411 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 SNX27Q96L92 541 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 ZNF558Q96NG5 402 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 PLVAPQ9BX97 442 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 MAPK8IP1Q9UQF2 711 aa21.2■□□□□ 0.98
HDAC4-212ENST00000495497 GOLGA8IPA6NC78 632 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 GOLGA8JA6NMD2 632 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 CLIC2O15247 247 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 GRM6O15303 877 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 SMC2O95347 1197 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 RB1P06400 928 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 GALTP07902 379 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 IGFBP4P22692 258 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 SPAG1Q07617 926 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 GRIK3Q13003 919 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 ISM2Q6H9L7 571 aa21.19■□□□□ 0.98
HDAC4-212ENST00000495497 TMEM173Q86WV6 379 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms