RNA–Protein interactions for RNA: ENST00000494669.2

FGD3-208, Transcript of FYVE, RhoGEF and PH domain containing 3, human

TSL 3

Gene FGD3, Length 915 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD3-208	ENST00000494669	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.73	□□□□□ -0.21
FGD3-208	ENST00000494669	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.73	□□□□□ -0.21
FGD3-208	ENST00000494669	KCNK12	Q9HB15	430 aa		13.73	□□□□□ -0.21
FGD3-208	ENST00000494669	POLD4	Q9HCU8	107 aa		13.73	□□□□□ -0.21
FGD3-208	ENST00000494669	AGPAT5	Q9NUQ2	364 aa		13.73	□□□□□ -0.21
FGD3-208	ENST00000494669	C2CD2L	O14523	706 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	BMP15	O95972	392 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	POMC	P01189	267 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	MYB	P10242	640 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	AOC1	P19801	751 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	ID4	P47928	161 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	NASP	P49321	788 aa	Predicted RBP	13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	CEBPZ	Q03701	1054 aa	Known RBP	13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	ZRSR1	Q15695	479 aa	Known RBP	13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	RINT1	Q6NUQ1	792 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	MAEA	Q7L5Y9	396 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	SIX5	Q8N196	739 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	KCTD17	Q8N5Z5	321 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	MCPH1	Q8NEM0	835 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	AK8	Q96MA6	479 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	RUSC1	Q9BVN2	902 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	RSAD1	Q9HA92	442 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	BLOC1S4	Q9NUP1	217 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	FBXL21	Q9UKT6	434 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	DUSP12	Q9UNI6	340 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	ZDHHC9	Q9Y397	364 aa		13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	SRPRB	Q9Y5M8	271 aa	Known RBP	13.72	□□□□□ -0.21
FGD3-208	ENST00000494669	TCHH	Q07283	1943 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	ARHGEF35	A5YM69	484 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	TTLL13P	A6NNM8	815 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	NRP1	O14786	923 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	SLC26A4	O43511	780 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	NARS	O43776	548 aa	Known RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	TSPAN1	O60635	241 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	LILRB3	O75022	631 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	N4BP1	O75113	896 aa	Known RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	EDN1	P05305	212 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	MARCKS	P29966	332 aa	Predicted RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	LONP1	P36776	959 aa	Known RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	SLC12A3	P55017	1021 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	SLC39A14	Q15043	492 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	ARSH	Q5FYA8	562 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	CCDC105	Q8IYK2	499 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	ADSSL1	Q8N142	457 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	SYT2	Q8N9I0	419 aa	Predicted RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	FAM193B	Q96PV7	902 aa	Predicted RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	CCSER1	Q9C0I3	900 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	CSRNP2	Q9H175	543 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	FZD8	Q9H461	694 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	MAN1C1	Q9NR34	630 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	MRPL17	Q9NRX2	175 aa	Known RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	DNM3	Q9UQ16	869 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	FAN1	Q9Y2M0	1017 aa		13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.71	□□□□□ -0.21
FGD3-208	ENST00000494669	C2orf16	Q68DN1	1984 aa		13.71	□□□□□ -0.22
FGD3-208	ENST00000494669	ALDH2	P05091	517 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	CFH	P08603	1231 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	ZSCAN22	P10073	491 aa	Predicted RBP	13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	ANGPT1	Q15389	498 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	PPP4R3CP	Q6ZMV5	832 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	C15orf39	Q6ZRI6	1047 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	TAS1R1	Q7RTX1	841 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	MRPL10	Q7Z7H8	261 aa	Known RBP	13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	LINC00301	Q8NCQ3	95 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	RSAD2	Q8WXG1	361 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	EPSTI1	Q96J88	318 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	CLIC6	Q96NY7	704 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	PLIN2	Q99541	437 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	CCDC113	Q9H0I3	377 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	STK39	Q9UEW8	545 aa		13.7	□□□□□ -0.22
FGD3-208	ENST00000494669	MED19	A0JLT2	244 aa	Predicted RBP	13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	STK25	O00506	426 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	B4GALT5	O43286	388 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	F13A1	P00488	732 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	SOD2	P04179	222 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	UROD	P06132	367 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	PDIA4	P13667	645 aa	Known RBP	13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	ARF4	P18085	180 aa	Predicted RBP	13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	GBP2	P32456	591 aa	Predicted RBP	13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	OR1G1	P47890	313 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	TFDP1	Q14186	410 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	FAM187B	Q17R55	369 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	SPECC1	Q5M775	1068 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	DTWD2	Q8NBA8	298 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	SMG8	Q8ND04	991 aa	Known RBP	13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	RTP3	Q9BQQ7	232 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	TMEM175	Q9BSA9	504 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	NT5C3A	Q9H0P0	336 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	MARCH5	Q9NX47	278 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	KANSL3	Q9P2N6	904 aa		13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	TFIP11	Q9UBB9	837 aa	Known RBP	13.69	□□□□□ -0.22
FGD3-208	ENST00000494669	CNTNAP2	Q9UHC6	1331 aa		13.68	□□□□□ -0.22
FGD3-208	ENST00000494669	ZFHX4	Q86UP3	3567 aa		13.68	□□□□□ -0.22
FGD3-208	ENST00000494669	CCDC195	A0A1B0GUA6	201 aa		13.68	□□□□□ -0.22
FGD3-208	ENST00000494669		A0A1B0GUA9	196 aa		13.68	□□□□□ -0.22
FGD3-208	ENST00000494669		F8W810	466 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms