RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 LACTB2Q53H82 288 aaPredicted RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 RIBC1Q8N443 379 aaPredicted RBP12.33□□□□□ -0.44
RFC4-214ENST00000494047 SH2D3CQ8N5H7 860 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 MAGEC3Q8TD91 643 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 GPR88Q9GZN0 384 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 UNC45AQ9H3U1 944 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 TMEM8AQ9HCN3 771 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 SAMD15Q9P1V8 674 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
RFC4-214ENST00000494047 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 THAP12O43422 761 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 STAM2O75886 525 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 ECEL1O95672 775 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 CYP1A2P05177 515 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 HOXA13P31271 388 aaPredicted RBP12.32□□□□□ -0.44
RFC4-214ENST00000494047 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
RFC4-214ENST00000494047 MMP13P45452 471 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 INHBEP58166 350 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 PSMC5P62195 406 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 PTP4A2Q12974 167 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 DMP1Q13316 513 aaPredicted RBP12.32□□□□□ -0.44
RFC4-214ENST00000494047 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 C6orf89Q6UWU4 347 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
RFC4-214ENST00000494047 CPLX4Q7Z7G2 160 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 SHC3Q92529 594 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 TATDN2Q93075 761 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 SLC10A4Q96EP9 437 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 CDHR1Q96JP9 859 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 TEPSINQ96N21 525 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 CENPHQ9H3R5 247 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 LRRC19Q9H756 370 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
RFC4-214ENST00000494047 ZDHHC18Q9NUE0 388 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 HSPBP1Q9NZL4 362 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 PCDHA3Q9Y5H8 950 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
RFC4-214ENST00000494047 CHMP2AO43633 222 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 SPOPO43791 374 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 USP2O75604 605 aaPredicted RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 ITIH2P19823 946 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 ABCB4P21439 1286 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 GARTP22102 1010 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 SLC8A1P32418 973 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 RARRES1P49788 294 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 LIG3P49916 1009 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 GTF2A1P52655 376 aaPredicted RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 CDR2Q01850 454 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 CENPCQ03188 943 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 NR1H3Q13133 447 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 ERMARDQ5T6L9 678 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 MAP4K3Q8IVH8 894 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 CCDC197Q8NCU1 140 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 MCPH1Q8NEM0 835 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 ATP8B4Q8TF62 1192 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 MAGOHBQ96A72 148 aaKnown RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 SERPINB12Q96P63 405 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 P2RX7Q99572 595 aaKnown RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 CCDC77Q9BR77 488 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 THAP2Q9H0W7 228 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 NOVA2Q9UNW9 492 aaKnown RBP12.31□□□□□ -0.44
RFC4-214ENST00000494047 ATP8A1Q9Y2Q0 1164 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 ACTL7BQ9Y614 415 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 CAPN7Q9Y6W3 813 aa12.31□□□□□ -0.44
RFC4-214ENST00000494047 CFAP73A6NFT4 308 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 CHUKO15111 745 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 TCEA3O75764 348 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 HSPA8P11142 646 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 ALAS1P13196 640 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 TM4SF4P48230 202 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 MAGOHP61326 146 aaKnown RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 PRKG1Q13976 671 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
RFC4-214ENST00000494047 ZNF746Q6NUN9 644 aaPredicted RBP12.3□□□□□ -0.44
RFC4-214ENST00000494047 CCDC137Q6PK04 289 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms