RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-205ENST00000493026 C12orf49Q9H741 205 aa13.71□□□□□ -0.21
PSMD11-205ENST00000493026 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
PSMD11-205ENST00000493026 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
PSMD11-205ENST00000493026 ECE2O60344 883 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 GZMAP12544 262 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 CYP2J2P51589 502 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 JAG1P78504 1218 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 COG2Q14746 738 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 ODF2Q5BJF6 829 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 SWT1Q5T5J6 900 aaKnown RBP13.71□□□□□ -0.22
PSMD11-205ENST00000493026 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 FAM160B2Q86V87 743 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 TAX1BP1Q86VP1 789 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 DNAAF5Q86Y56 855 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 SYCP3Q8IZU3 236 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 C1orf216Q8TAB5 229 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 CYFIP2Q96F07 1278 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 TIPINQ9BVW5 301 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 THAP2Q9H0W7 228 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 PABPC3Q9H361 631 aaKnown RBP13.71□□□□□ -0.22
PSMD11-205ENST00000493026 ST6GALNAC4Q9H4F1 302 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 PCYOX1Q9UHG3 505 aa13.71□□□□□ -0.22
PSMD11-205ENST00000493026 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
PSMD11-205ENST00000493026 FLT3P36888 993 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 SEC24CP53992 1094 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 GPC5P78333 572 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 FLAD1Q8NFF5 587 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 OR2W6PQ8NHA6 318 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 CSRNP1Q96S65 589 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 TMEM109Q9BVC6 243 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 ACTR5Q9H9F9 607 aaPredicted RBP13.7□□□□□ -0.22
PSMD11-205ENST00000493026 DBR1Q9UK59 544 aaKnown RBP13.7□□□□□ -0.22
PSMD11-205ENST00000493026 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 ALG6Q9Y672 507 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 ZNF536O15090 1300 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 IGSF9BQ9UPX0 1349 aa13.7□□□□□ -0.22
PSMD11-205ENST00000493026 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 IPO5O00410 1097 aaKnown RBP13.69□□□□□ -0.22
PSMD11-205ENST00000493026 CHMP2AO43633 222 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 PHF2O75151 1096 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 CTSHP09668 335 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 ABCB4P21439 1286 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 KRT71Q3SY84 523 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 STYK1Q6J9G0 422 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 KAT2BQ92831 832 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 ARHGEF26Q96DR7 871 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 LXNQ9BS40 222 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
PSMD11-205ENST00000493026 AFF2P51816 1311 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 KIAA0391O15091 583 aaKnown RBP13.69□□□□□ -0.22
PSMD11-205ENST00000493026 HIP1RO75146 1068 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 RTN2O75298 545 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 LYPLA2O95372 231 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 IFFO1Q0D2I5 559 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 EPC2Q52LR7 807 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 DAW1Q8N136 415 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 C8orf48Q96LL4 319 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 ACCSQ96QU6 501 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 WNT8AQ9H1J5 351 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 POLD4Q9HCU8 107 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 COG5Q9UP83 839 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
PSMD11-205ENST00000493026 ZBTB39O15060 712 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 CTNNA2P26232 953 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 VAMP7P51809 220 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 DAB2P98082 770 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 ACTN3Q08043 901 aaPredicted RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 RRP1BQ14684 758 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 COL19A1Q14993 1142 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 ZNF280DQ6N043 979 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 ALG3Q92685 438 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 ZSWIM1Q9BR11 485 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 MXRA8Q9BRK3 442 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 DPH5Q9H2P9 285 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 IKZF4Q9H2S9 585 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 PPANQ9NQ55 473 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 WRAP73Q9P2S5 460 aaPredicted RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 HNRNPH1P31943 449 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 SMTNP53814 917 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 PMS2P54278 862 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 MAGOHP61326 146 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 PRPF4BQ13523 1007 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 PRPF38BQ5VTL8 546 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 SPICE1Q8N0Z3 855 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 MAGOHBQ96A72 148 aaKnown RBP13.68□□□□□ -0.22
PSMD11-205ENST00000493026 HOOK2Q96ED9 719 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
PSMD11-205ENST00000493026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.68□□□□□ -0.222e-20■■■■■ 219.3
PSMD11-205ENST00000493026 UBE2TQ9NPD8 197 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms