RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 ZNF280BQ86YH2 543 aa15□□□□□ -0.01
CDK9-204ENST00000491521 BCL7CQ8WUZ0 217 aaPredicted RBP15□□□□□ -0.01
CDK9-204ENST00000491521 DDX12PQ92771 950 aa15□□□□□ -0.01
CDK9-204ENST00000491521 SMARCE1Q969G3 411 aa15□□□□□ -0.01
CDK9-204ENST00000491521 CCDC47Q96A33 483 aaKnown RBP15□□□□□ -0.01
CDK9-204ENST00000491521 FAM193BQ96PV7 902 aaPredicted RBP15□□□□□ -0.01
CDK9-204ENST00000491521 RSAD1Q9HA92 442 aa15□□□□□ -0.01
CDK9-204ENST00000491521 NGRNQ9NPE2 291 aaKnown RBP15□□□□□ -0.01
CDK9-204ENST00000491521 USP15Q9Y4E8 981 aaPredicted RBP15□□□□□ -0.01
CDK9-204ENST00000491521 HES2Q9Y543 173 aa15□□□□□ -0.01
CDK9-204ENST00000491521 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.99□□□□□ -0.01
CDK9-204ENST00000491521 B4GALT5O43286 388 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 B4GALT3O60512 393 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 CXCL14O95715 111 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 GALTP07902 379 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 SRGAP2BP0DMP2 458 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 SLC11A1P49279 550 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 TMEM132AQ24JP5 1023 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 ARSHQ5FYA8 562 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 TMEM31Q5JXX7 168 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 NOTUMQ6P988 496 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 MRPL10Q7Z7H8 261 aaKnown RBP14.99□□□□□ -0.01
CDK9-204ENST00000491521 VPS52Q8N1B4 723 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 SMRP1Q8NCR6 262 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 CDCA3Q99618 268 aaPredicted RBP14.99□□□□□ -0.01
CDK9-204ENST00000491521 RUSC1Q9BVN2 902 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 TRIM9Q9C026 710 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 TRIM6Q9C030 488 aaPredicted RBP14.99□□□□□ -0.01
CDK9-204ENST00000491521 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 POLD4Q9HCU8 107 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 KIAA1468Q9P260 1216 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 PRKAG3Q9UGI9 489 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 IPPQ9Y573 584 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 PCDHA5Q9Y5H7 936 aa14.99□□□□□ -0.01
CDK9-204ENST00000491521 CNTNAP2Q9UHC6 1331 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 C2orf71A6NGG8 1288 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 BIN1O00499 593 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 NPTXRO95502 500 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
CDK9-204ENST00000491521 ARF4P18085 180 aaPredicted RBP14.98□□□□□ -0.01
CDK9-204ENST00000491521 MLH1P40692 756 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
CDK9-204ENST00000491521 DPYDQ12882 1025 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 COASYQ13057 564 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 ZSCAN23Q3MJ62 389 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 ISM2Q6H9L7 571 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 C1orf186Q6ZWK4 172 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 CCDC65Q8IXS2 484 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 SMG8Q8ND04 991 aaKnown RBP14.98□□□□□ -0.01
CDK9-204ENST00000491521 IGSF21Q96ID5 467 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 POP1Q99575 1024 aaKnown RBP14.98□□□□□ -0.01
CDK9-204ENST00000491521 LRFN3Q9BTN0 628 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 KCND2Q9NZV8 630 aa14.98□□□□□ -0.01
CDK9-204ENST00000491521 SYCE3A1L190 88 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 TBCAO75347 108 aaKnown RBP14.97□□□□□ -0.01
CDK9-204ENST00000491521 DDHD2O94830 711 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 FAM13AO94988 1023 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
CDK9-204ENST00000491521 AKAP5P24588 427 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 AXLP30530 894 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 GIT2Q14161 759 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 BMS1Q14692 1282 aaKnown RBP14.97□□□□□ -0.01
CDK9-204ENST00000491521 AMHR2Q16671 573 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 ZBTB8OSQ8IWT0 167 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 MRPL43Q8N983 215 aaKnown RBP14.97□□□□□ -0.01
CDK9-204ENST00000491521 MCPH1Q8NEM0 835 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 RPGRIP1Q96KN7 1286 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 GAD1Q99259 594 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 NXF3Q9H4D5 531 aaKnown RBP14.97□□□□□ -0.01
CDK9-204ENST00000491521 PANK4Q9NVE7 773 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 RMND1Q9NWS8 449 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 MUTYHQ9UIF7 546 aa14.97□□□□□ -0.01
CDK9-204ENST00000491521 PRG3Q9Y2Y8 225 aaPredicted RBP14.97□□□□□ -0.01
CDK9-204ENST00000491521 TDRD15B5MCY1 1934 aaKnown RBP14.96□□□□□ -0.01
CDK9-204ENST00000491521 PVALEFA0A1B0GWK0 134 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 FSD2A1L4K1 749 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 ARL5CA6NH57 179 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 C19orf67A6NJJ6 358 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 SFI1A8K8P3 1242 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 DCXO43602 365 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 CLASP2O75122 1294 aaKnown RBP14.96□□□□□ -0.01
CDK9-204ENST00000491521 HIP1RO75146 1068 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 ALADP13716 330 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 GUCY2CP25092 1073 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 OR1G1P47890 313 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 SCNN1GP51170 649 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 HERC4Q5GLZ8 1057 aaPredicted RBP14.96□□□□□ -0.01
CDK9-204ENST00000491521 ANKRD54Q6NXT1 300 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 DDX53Q86TM3 631 aaKnown RBP14.96□□□□□ -0.01
CDK9-204ENST00000491521 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
CDK9-204ENST00000491521 MYCT1Q8N699 235 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 RSPH1Q8WYR4 309 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 BSNDQ8WZ55 320 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 DNAJC19Q96DA6 116 aa14.96□□□□□ -0.01
CDK9-204ENST00000491521 CCDC51Q96ER9 411 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms