RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SSX2IPQ9Y2D8 614 aa19.82■□□□□ 0.76
HMGN1-219ENST00000491183 TECTAO75443 2155 aa19.82■□□□□ 0.76
HMGN1-219ENST00000491183 TRIP11Q15643 1979 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 THP07101 528 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 ZXDAP98168 799 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 ATAT1Q5SQI0 421 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 KIAA1841Q6NSI8 718 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 HFE2Q6ZVN8 426 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 SYT2Q8N9I0 419 aaPredicted RBP19.81■□□□□ 0.76
HMGN1-219ENST00000491183 RIPOR3Q96MK2 946 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 TMEM134Q9H6X4 195 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 PTPRHQ9HD43 1115 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 ARHGAP28Q9P2N2 729 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 ADAM28Q9UKQ2 775 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 TNFSF13BQ9Y275 285 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 GDAQ9Y2T3 454 aa19.81■□□□□ 0.76
HMGN1-219ENST00000491183 CASTOR2A6NHX0 329 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 C2CD4DB7Z1M9 353 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 TADA2AO75478 443 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 GUCY2CP25092 1073 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 SLC12A3P55017 1021 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 HSP90AA2PQ14568 343 aaPredicted RBP19.8■□□□□ 0.76
HMGN1-219ENST00000491183 DCAF4L1Q3SXM0 396 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 TMEM119Q4V9L6 283 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 TRIM67Q6ZTA4 783 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 GPR149Q86SP6 731 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 KCTD17Q8N5Z5 321 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 DRC1Q96MC2 740 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 ACO2Q99798 780 aaKnown RBP19.8■□□□□ 0.76
HMGN1-219ENST00000491183 NTPCRQ9BSD7 190 aaKnown RBP19.8■□□□□ 0.76
HMGN1-219ENST00000491183 SFXN1Q9H9B4 322 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 KMT5AQ9NQR1 393 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 TSHZ2Q9NRE2 1034 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 HCN4Q9Y3Q4 1203 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 MYO10Q9HD67 2058 aa19.8■□□□□ 0.76
HMGN1-219ENST00000491183 PHLPP2Q6ZVD8 1323 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 SLC16A4O15374 487 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 IGFBP6P24592 240 aaPredicted RBP19.79■□□□□ 0.76
HMGN1-219ENST00000491183 RAD51AP2Q09MP3 1159 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 DMP1Q13316 513 aaPredicted RBP19.79■□□□□ 0.76
HMGN1-219ENST00000491183 USP41Q3LFD5 358 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 GPR65Q8IYL9 337 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 CEP120Q8N960 986 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 TIPINQ9BVW5 301 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 TARS2Q9BW92 718 aaKnown RBP19.79■□□□□ 0.76
HMGN1-219ENST00000491183 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 NT5C3AQ9H0P0 336 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 CDT1Q9H211 546 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 C17orf75Q9HAS0 396 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 NR2E1Q9Y466 385 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 RBM19Q9Y4C8 960 aaKnown RBP19.79■□□□□ 0.76
HMGN1-219ENST00000491183 ARIH1Q9Y4X5 557 aaPredicted RBP19.79■□□□□ 0.76
HMGN1-219ENST00000491183 MYH11P35749 1972 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 C2orf16Q68DN1 1984 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 TRIOO75962 3097 aa19.79■□□□□ 0.76
HMGN1-219ENST00000491183 KIF4AO95239 1232 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 ADH1AP07327 375 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 PLA2G4BP0C869 781 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 MYBP10242 640 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 GRIN1Q05586 938 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 PTPN21Q16825 1174 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 BRAPQ7Z569 592 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 LRRC15Q8TF66 581 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 HASPINQ8TF76 798 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 RIN2Q8WYP3 895 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-219ENST00000491183 MRPL4Q9BYD3 311 aaKnown RBP19.78■□□□□ 0.76
HMGN1-219ENST00000491183 MAN1C1Q9NR34 630 aa19.78■□□□□ 0.76
HMGN1-219ENST00000491183 DAXXQ9UER7 740 aaPredicted RBP19.78■□□□□ 0.76
HMGN1-219ENST00000491183 MTCL1Q9Y4B5 1905 aaKnown RBP19.78■□□□□ 0.76
HMGN1-219ENST00000491183 DENND4AQ7Z401 1863 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 NPHP3-ACAD11A0A0J9YXS1 232 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 TMEM221A6NGB7 291 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 M0R296 226 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 ABLIM1O14639 778 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 SPATA31D3P0C874 917 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 PLS3P13797 630 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 SF3A1Q15459 793 aaKnown RBP19.77■□□□□ 0.76
HMGN1-219ENST00000491183 ARSHQ5FYA8 562 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 GLRA4Q5JXX5 417 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 RTP2Q5QGT7 225 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 PRSS55Q6UWB4 352 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-219ENST00000491183 SPATA31D4Q6ZUB0 917 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 BMP8AQ7Z5Y6 402 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 PALB2Q86YC2 1186 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 SPIRE2Q8WWL2 714 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 CDK5RAP3Q96JB5 506 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 AK8Q96MA6 479 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 PPP1R10Q96QC0 940 aaKnown RBP19.77■□□□□ 0.76
HMGN1-219ENST00000491183 FNIP2Q9P278 1114 aa19.77■□□□□ 0.76
HMGN1-219ENST00000491183 GLUD1P00367 558 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 RPL17P18621 184 aaKnown RBP19.76■□□□□ 0.75
HMGN1-219ENST00000491183 PROZP22891 400 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 GRM5P41594 1212 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 ZNF568Q3ZCX4 644 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 XKR4Q5GH76 650 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 LILRA6Q6PI73 481 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 ALKAL1Q6UXT8 129 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 C15orf39Q6ZRI6 1047 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 ZBTB33Q86T24 672 aa19.76■□□□□ 0.75
HMGN1-219ENST00000491183 GLYCTKQ8IVS8 523 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms