RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CYP39A1Q9NYL5 469 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 DNM3Q9UQ16 869 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 ARHGEF18Q6ZSZ5 1173 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 INTS8Q75QN2 995 aaKnown RBP20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 MIGA2Q7L4E1 593 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 LMNTD2Q8IXW0 634 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 ADGRF4Q8IZF3 695 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 STK32AQ8WU08 396 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 MYLK2Q9H1R3 596 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 BCAS3Q9H6U6 928 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 PSTPIP2Q9H939 334 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 FAM198AQ9UFP1 575 aa20.7■□□□□ 0.9
SNAPC3-206ENST00000490969 MYO3BQ8WXR4 1341 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 AP1G2O75843 785 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 ECEL1O95672 775 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 COMTP21964 271 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 PCK1P35558 622 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 PSMC2P35998 433 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 SH3BP5LQ7L8J4 393 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 SLC13A5Q86YT5 568 aaPredicted RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 PRMT6Q96LA8 375 aaPredicted RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 RPS6KC1Q96S38 1066 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 DDTLA6NHG4 134 aaPredicted RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 TP73O15350 636 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 TGFB1I1O43294 461 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 TPBGLP0DKB5 382 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 AKR1B1P15121 316 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 BRD2P25440 801 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 EIF6P56537 245 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 MRPS35P82673 323 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 AGGF1Q8N302 714 aaeCLIP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 POP1Q99575 1024 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 TSC22D3Q99576 134 aa20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 TDRD3Q9H7E2 651 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-206ENST00000490969 LRRD1A4D1F6 860 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 ABLIM1O14639 778 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 ATP5HO75947 161 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 SNHG28P0DPA3 235 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 TAC1P20366 129 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 ATP6V1C1P21283 382 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 KIF22Q14807 665 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 SIX1Q15475 284 aaPredicted RBP20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 ARHGAP44Q17R89 818 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 LARGE2Q8N3Y3 721 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 AGPAT1Q99943 283 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 PITPNM3Q9BZ71 974 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 INTS2Q9H0H0 1204 aaKnown RBP20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 IKZF4Q9H2S9 585 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 DNAJC18Q9H819 358 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 NKIRAS1Q9NYS0 192 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 WHRNQ9P202 907 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 APEX2Q9UBZ4 518 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 FTLP02792 175 aaPredicted RBP20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 CHKAP35790 457 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 STRN3Q13033 797 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 MESDQ14696 234 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 CBWD6Q4V339 395 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 CMPK2Q5EBM0 449 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 CBWD3Q5JTY5 395 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 CBWD5Q5RIA9 395 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 VSIG1Q86XK7 387 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 MTMR4Q9NYA4 1195 aa20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 CPSF2Q9P2I0 782 aaKnown RBP20.68■□□□□ 0.9
SNAPC3-206ENST00000490969 TTC4O95801 387 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 GM2AP17900 193 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 RNASELQ05823 741 aaKnown RBP20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SPIRE1Q08AE8 756 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SETDB1Q15047 1291 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 GNPTABQ3T906 1256 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 FAM47EQ6ZV65 393 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 CYP4X1Q8N118 509 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 FAM13CQ8NE31 585 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SLC20A1Q8WUM9 679 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 ERP27Q96DN0 273 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 TMEM237Q96Q45 408 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 RUSC1Q9BVN2 902 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 WNT8AQ9H1J5 351 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 LRRN2O75325 713 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 TBCAO75347 108 aaKnown RBP20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SPATA31C1P0DKV0 1188 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 FOXN2P32314 431 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SHMT1P34896 483 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 MXRA7P84157 204 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 TCEAL1Q15170 157 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 RHBDF2Q6PJF5 856 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SEPT14Q6ZU15 432 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 SLFN12Q8IYM2 578 aa20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 C12orf50Q8NA57 414 aaPredicted RBP20.67■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L15C9J2P7 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L13C9JLJ4 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L11C9JVI0 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L18D6R9N7 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L22D6RA61 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L17D6RBQ6 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L19D6RCP7 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 USP17L20D6RJB6 530 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 FOXN3O00409 490 aaPredicted RBP20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 SMIM24O75264 130 aa20.66■□□□□ 0.9
SNAPC3-206ENST00000490969 EYA4O95677 639 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms