RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LSMEM1Q8N8F7 131 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 OR10H5Q8NGA6 315 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 ADAMTS18Q8TE60 1221 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 FRS2Q8WU20 508 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 LRTOMTQ8WZ04 291 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 HDAC2Q92769 488 aaKnown RBP4□□□□□ -1.77
PRPF4-203ENST00000488937 TSPAN17Q96FV3 270 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 TMEM41AQ96HV5 264 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 PTCHD1Q96NR3 888 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 SEC62Q99442 399 aaKnown RBP4□□□□□ -1.77
PRPF4-203ENST00000488937 CENPOQ9BU64 300 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 LSM14BQ9BX40 385 aaKnown RBP4□□□□□ -1.77
PRPF4-203ENST00000488937 PRKRIP1Q9H875 184 aaPredicted RBP4□□□□□ -1.77
PRPF4-203ENST00000488937 CERS4Q9HA82 394 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 KMT5AQ9NQR1 393 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 STARD7Q9NQZ5 370 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 SMC4Q9NTJ3 1288 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 CWC25Q9NXE8 425 aaPredicted RBP4□□□□□ -1.77
PRPF4-203ENST00000488937 ARHGAP28Q9P2N2 729 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 PPARGC1AQ9UBK2 798 aaKnown RBP4□□□□□ -1.77
PRPF4-203ENST00000488937 FBXO10Q9UK96 956 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 AFG3L2Q9Y4W6 797 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 GPR45Q9Y5Y3 372 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 BACE2Q9Y5Z0 518 aa4□□□□□ -1.77
PRPF4-203ENST00000488937 CCDC66A2RUB6 948 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 MROH6A6NGR9 719 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 CAPN8A6NHC0 703 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 B4E171 279 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 STXBP3O00186 592 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 ADAMTS3O15072 1205 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 FRS3O43559 492 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 NCK2O43639 380 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 PLOD3O60568 738 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 NDUFS2O75306 463 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 CSTBP04080 98 aaKnown RBP3.99□□□□□ -1.77
PRPF4-203ENST00000488937 DHRS4L1P0CG22 281 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 MYF5P13349 255 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 SMARCA1P28370 1054 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 PDIA3P30101 505 aaKnown RBP3.99□□□□□ -1.77
PRPF4-203ENST00000488937 LACTBP83111 547 aaPredicted RBP3.99□□□□□ -1.77
PRPF4-203ENST00000488937 ROR1Q01973 937 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 DPTQ07507 201 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 MOGSQ13724 837 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 CLUL1Q15846 466 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 FKBP15Q5T1M5 1219 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 AGAP9Q5VTM2 703 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 RFX8Q6ZV50 586 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 NEK10Q6ZWH5 1172 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 C16orf59Q7L2K0 433 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 KCNK18Q7Z418 384 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 TMTC1Q8IUR5 882 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 NLGN2Q8NFZ4 835 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 TRAPPC12Q8WVT3 735 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 BRI3BPQ8WY22 251 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 TRIM63Q969Q1 353 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 COA7Q96BR5 231 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 ZBTB8AQ96BR9 441 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 PAWRQ96IZ0 340 aaKnown RBP3.99□□□□□ -1.77
PRPF4-203ENST00000488937 ACAP3Q96P50 834 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 SLC26A6Q9BXS9 759 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 MS4A5Q9H3V2 200 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 ATP6V0A4Q9HBG4 840 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 ACAD8Q9UKU7 415 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 TCAF1Q9Y4C2 921 aa3.99□□□□□ -1.77
PRPF4-203ENST00000488937 C2orf71A6NGG8 1288 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 F5H0A9 414 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 DVL2O14641 736 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 LAMTOR5O43504 91 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 FGF18O76093 207 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 GFPT2O94808 682 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ALDH2P05091 517 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 THBDP07204 575 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 SRGAP2CP0DJJ0 459 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 GLULP15104 373 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 TSHRP16473 764 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 RPL17P18621 184 aaKnown RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 RPL13P26373 211 aaKnown RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 HTR1BP28222 390 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 HOXD12P35452 270 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 MC3RP41968 323 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 SELENOPP49908 381 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ARL4CP56559 192 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 KRT83P78385 493 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 ALDH6A1Q02252 535 aaKnown RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 CACNB2Q08289 660 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 GALNT1Q10472 559 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 SCRN1Q12765 414 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 FOXO1Q12778 655 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 DPY19L1Q2PZI1 675 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 PGS1Q32NB8 556 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 FAM47CQ5HY64 1035 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 FAM209BQ5JX69 171 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 E4F1Q66K89 784 aaPredicted RBP3.98□□□□□ -1.77
PRPF4-203ENST00000488937 C4orf50Q6ZRC1 276 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 MAEAQ7L5Y9 396 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 CCDC103Q8IW40 242 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 CAMKK1Q8N5S9 505 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 AMER2Q8N7J2 671 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 RNF152Q8N8N0 203 aa3.98□□□□□ -1.77
PRPF4-203ENST00000488937 PCYOX1LQ8NBM8 494 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms