RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
SENP6-210ENST00000487548 PRSS38A1L453 326 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 DRGXA6NNA5 263 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 ELANEP08246 267 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 SDSP20132 328 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 BMT2Q1RMZ1 405 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 MFSD14BQ5SR56 506 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 PRAMEF14Q5SWL7 426 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 ATXN7L2Q5T6C5 722 aaPredicted RBP4.33□□□□□ -1.72
SENP6-210ENST00000487548 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 METRNLQ641Q3 311 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 GLB1L2Q8IW92 636 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 ZFP28Q8NHY6 868 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 SLC35B2Q8TB61 432 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 CHTF18Q8WVB6 975 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 AIFM2Q9BRQ8 373 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 ANO3Q9BYT9 981 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 TBCCD1Q9NVR7 557 aa4.33□□□□□ -1.72
SENP6-210ENST00000487548 EVLQ9UI08 416 aaPredicted RBP4.33□□□□□ -1.72
SENP6-210ENST00000487548 ADCY6O43306 1168 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 KPNA6O60684 536 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 GAS7O60861 476 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 LTA4HP09960 611 aaKnown RBP4.32□□□□□ -1.72
SENP6-210ENST00000487548 RBM25P49756 843 aaKnown RBP4.32□□□□□ -1.72
SENP6-210ENST00000487548 CACNA2D1P54289 1103 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 NHLH1Q02575 133 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 RRP12Q5JTH9 1297 aaKnown RBP4.32□□□□□ -1.72
SENP6-210ENST00000487548 AGAP9Q5VTM2 703 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 MED25Q71SY5 747 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 TMEM132CQ8N3T6 1108 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 SH2D3CQ8N5H7 860 aa4.32□□□□□ -1.72
SENP6-210ENST00000487548 HIRIP3Q9BW71 556 aaPredicted RBP4.32□□□□□ -1.72
SENP6-210ENST00000487548 SETD1BQ9UPS6 1966 aaKnown RBP4.31□□□□□ -1.72
SENP6-210ENST00000487548 AATKQ6ZMQ8 1374 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 ZNF891A8MT65 544 aaPredicted RBP4.31□□□□□ -1.72
SENP6-210ENST00000487548 PTPN7P35236 360 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 B3GNTL1Q67FW5 361 aaPredicted RBP4.31□□□□□ -1.72
SENP6-210ENST00000487548 ARMC6Q6NXE6 501 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 PASD1Q8IV76 773 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 LILRB2Q8N423 598 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 C9orf106Q8NAJ2 232 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 REPS2Q8NFH8 660 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 PMFBP1Q8TBY8 1022 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 KLHL11Q9NVR0 708 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 GPRC5DQ9NZD1 345 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 FOXJ2Q9P0K8 574 aa4.31□□□□□ -1.72
SENP6-210ENST00000487548 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 TMEM127O75204 238 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 PROK1P58294 105 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 EXOSC10Q01780 885 aaKnown RBP4.3□□□□□ -1.72
SENP6-210ENST00000487548 OCA2Q04671 838 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 LRRC32Q14392 662 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 ZNF788Q6ZQV5 615 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 PDZD4Q76G19 769 aaPredicted RBP4.3□□□□□ -1.72
SENP6-210ENST00000487548 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 EFHBQ8N7U6 833 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 JMYQ8N9B5 988 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
SENP6-210ENST00000487548 HEPHQ9BQS7 1158 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 SLC17A6Q9P2U8 582 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 PPP2R3BQ9Y5P8 575 aa4.3□□□□□ -1.72
SENP6-210ENST00000487548 A0A1B0GTW7 788 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 MANSC4A6NHS7 340 aaPredicted RBP4.29□□□□□ -1.72
SENP6-210ENST00000487548 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
SENP6-210ENST00000487548 GPR15P49685 360 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 NEK4P51957 841 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 CXADRP78310 365 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 HSD11B2P80365 405 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 TRIM25Q14258 630 aaKnown RBP4.29□□□□□ -1.72
SENP6-210ENST00000487548 SRSF7Q16629 238 aaKnown RBP eCLIP4.29□□□□□ -1.72
SENP6-210ENST00000487548 FNDC3BQ53EP0 1204 aaKnown RBP4.29□□□□□ -1.72
SENP6-210ENST00000487548 SNX33Q8WV41 574 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 GPR101Q96P66 508 aaPredicted RBP4.29□□□□□ -1.72
SENP6-210ENST00000487548 PRDM12Q9H4Q4 367 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 CPNE5Q9HCH3 593 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 USP25Q9UHP3 1055 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 PRSS50Q9UI38 385 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 EDARQ9UNE0 448 aa4.29□□□□□ -1.72
SENP6-210ENST00000487548 MTO1Q9Y2Z2 717 aaKnown RBP4.29□□□□□ -1.72
SENP6-210ENST00000487548 CCDC78A2IDD5 438 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 CXorf49A8MYA2 514 aaPredicted RBP4.28□□□□□ -1.72
SENP6-210ENST00000487548 TGM5O43548 720 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 FGFR4P22455 802 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 KPNA1P52294 538 aaPredicted RBP4.28□□□□□ -1.72
SENP6-210ENST00000487548 CLRN1P58418 232 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
SENP6-210ENST00000487548 CCDC178Q5BJE1 867 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 C1QL2Q7Z5L3 287 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 ZNF480Q8WV37 535 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 ANKS1AQ92625 1134 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 PDLIM2Q96JY6 352 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 C1QTNF7Q9BXJ2 289 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 REXO4Q9GZR2 422 aaKnown RBP4.28□□□□□ -1.72
SENP6-210ENST00000487548 GALNT9Q9HCQ5 603 aa4.28□□□□□ -1.72
SENP6-210ENST00000487548 ZNF70Q9UC06 446 aaPredicted RBP4.28□□□□□ -1.72
SENP6-210ENST00000487548 GPANK1O95872 356 aa4.27□□□□□ -1.73
SENP6-210ENST00000487548 LPLP06858 475 aa4.27□□□□□ -1.73
SENP6-210ENST00000487548 CTSSP25774 331 aa4.27□□□□□ -1.73
SENP6-210ENST00000487548 ADSLP30566 484 aaPredicted RBP4.27□□□□□ -1.73
SENP6-210ENST00000487548 MAPK7Q13164 816 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms