RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 MSRAQ9UJ68 235 aa13.92□□□□□ -0.18
PRDM2-208ENST00000487453 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
PRDM2-208ENST00000487453 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 GOLGA8IPA6NC78 632 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 GOLGA8JA6NMD2 632 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 PSMA7O14818 248 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 CALUO43852 315 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 CA3P07451 260 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 CXCL8P10145 99 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 BMP6P22004 513 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 GARTP22102 1010 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 DNAJB2P25686 324 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 ADSSP30520 456 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 PPP1R2P41236 205 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 ACOT2P49753 483 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 SMAD3P84022 425 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 RNASELQ05823 741 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 KYAT1Q16773 422 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 LRIT3Q3SXY7 679 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 NOMO2Q5JPE7 1267 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 ZBTB41Q5SVQ8 909 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 CMTR2Q8IYT2 770 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 ZNF689Q96CS4 500 aaPredicted RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 ACAP3Q96P50 834 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 GAD1Q99259 594 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 KCTD10Q9H3F6 313 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 RNF19AQ9NV58 838 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 HSPBP1Q9NZL4 362 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 CTNND2Q9UQB3 1225 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 YBX2Q9Y2T7 364 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 GIT1Q9Y2X7 761 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 STYXL1Q9Y6J8 313 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 TDRD15B5MCY1 1934 aaKnown RBP13.91□□□□□ -0.18
PRDM2-208ENST00000487453 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
PRDM2-208ENST00000487453 CEP290O15078 2479 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 PDXKO00764 312 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 FAM189A1O60320 539 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 OFD1O75665 1012 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 POMCP01189 267 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 CLTAP09496 248 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 SCNN1GP51170 649 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 SNRPFP62306 86 aaKnown RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 PPP2R3AQ06190 1150 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 GLRA4Q5JXX5 417 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 PPP2R2DQ66LE6 453 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 ADSSL1Q8N142 457 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 GPD1LQ8N335 351 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 FIBCD1Q8N539 461 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 SNX27Q96L92 541 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 CASD1Q96PB1 797 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 TSG101Q99816 390 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 NKX2-4Q9H2Z4 354 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 RPF1Q9H9Y2 349 aaKnown RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
PRDM2-208ENST00000487453 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
PRDM2-208ENST00000487453 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 EXTL3O43909 919 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 EXOC3O60645 756 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 NR3C1P04150 777 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 NR2F2P24468 414 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 DPCR1Q3MIW9 517 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 RBM43Q6ZSC3 357 aaKnown RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 RSPH1Q8WYR4 309 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 P2RX5Q93086 422 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 DACH1Q9UI36 760 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 TRAF3IP3Q9Y228 551 aa13.89□□□□□ -0.19
PRDM2-208ENST00000487453 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 PDCD11Q14690 1871 aaKnown RBP13.89□□□□□ -0.19
PRDM2-208ENST00000487453 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
PRDM2-208ENST00000487453 CITO14578 2027 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 TRIM49BA6NDI0 452 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 ZC3H11AO75152 810 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRDM2-208ENST00000487453 NLRP12P59046 1061 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 GRIK3Q13003 919 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 PAK1Q13153 545 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
PRDM2-208ENST00000487453 ENOX2Q16206 610 aaKnown RBP13.88□□□□□ -0.19
PRDM2-208ENST00000487453 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
PRDM2-208ENST00000487453 ZCWPW2Q504Y3 356 aa13.88□□□□□ -0.19
PRDM2-208ENST00000487453 CEP135Q66GS9 1140 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms