RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MRPL42Q9Y6G3 142 aaKnown RBP29.31■■■□□ 2.28
CCM2-211ENST00000478582 CLDN3O15551 220 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 KCNA1Q09470 495 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 KCNB1Q14721 858 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 PAN2Q504Q3 1202 aaKnown RBP29.3■■■□□ 2.28
CCM2-211ENST00000478582 SLC39A4Q6P5W5 647 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 GLIS3Q8NEA6 775 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 CCDC47Q96A33 483 aaKnown RBP29.3■■■□□ 2.28
CCM2-211ENST00000478582 ASB2Q96Q27 587 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 C11orf84Q9BUA3 381 aaPredicted RBP29.3■■■□□ 2.28
CCM2-211ENST00000478582 PLVAPQ9BX97 442 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 TMEM206Q9H813 350 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 COG5Q9UP83 839 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 STYXL1Q9Y6J8 313 aa29.3■■■□□ 2.28
CCM2-211ENST00000478582 PRPF6O94906 941 aaKnown RBP29.29■■■□□ 2.28
CCM2-211ENST00000478582 RHOBTB3O94955 611 aa29.29■■■□□ 2.28
CCM2-211ENST00000478582 GRM5P41594 1212 aa29.29■■■□□ 2.28
CCM2-211ENST00000478582 NOLC1Q14978 699 aaKnown RBP eCLIP29.29■■■□□ 2.28
CCM2-211ENST00000478582 MRPL9Q9BYD2 267 aaKnown RBP29.29■■■□□ 2.28
CCM2-211ENST00000478582 SNTG2Q9NY99 539 aa29.29■■■□□ 2.28
CCM2-211ENST00000478582 FNDC1Q4ZHG4 1894 aaPredicted RBP29.29■■■□□ 2.28
CCM2-211ENST00000478582 UBE4BO95155 1302 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 ANKRD63C9JTQ0 380 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 GOLGA6L22H0YM25 854 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 PNOCQ13519 176 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 NOMO2Q5JPE7 1267 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 SLFN12LQ6IEE8 588 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 ZBTB33Q86T24 672 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 LRRC43Q8N309 656 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 SPATA20Q8TB22 786 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 HAPLN2Q9GZV7 340 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 SLC39A2Q9NP94 309 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 ANKFY1Q9P2R3 1169 aa29.28■■■□□ 2.28
CCM2-211ENST00000478582 A0A0B4J269 797 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 AKAP5P24588 427 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 STK4Q13043 487 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 BMT2Q1RMZ1 405 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 LRRC55Q6ZSA7 311 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 P2RX5Q93086 422 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 APOL6Q9BWW8 343 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 LMAN2LQ9H0V9 348 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 KANSL3Q9P2N6 904 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 PARP2Q9UGN5 583 aa29.27■■■□□ 2.28
CCM2-211ENST00000478582 REV3LO60673 3130 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 ARL5CA6NH57 179 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 HOXD13P35453 343 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 KYAT1Q16773 422 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 URGCPQ8TCY9 931 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 SCFD1Q8WVM8 642 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 HLA-CQ95604 372 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 GSDMAQ96QA5 445 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 GAD1Q99259 594 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 CCDC94Q9BW85 323 aaPredicted RBP29.26■■■□□ 2.27
CCM2-211ENST00000478582 CWH43Q9H720 699 aa29.26■■■□□ 2.27
CCM2-211ENST00000478582 TYW1Q9NV66 732 aaKnown RBP29.26■■■□□ 2.27
CCM2-211ENST00000478582 GRM6O15303 877 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 SMC2O95347 1197 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 AAK1Q2M2I8 961 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 TIGD5Q53EQ6 642 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 SYCP3Q8IZU3 236 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 CEP120Q8N960 986 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 KIAA0895Q8NCT3 520 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 IKZF4Q9H2S9 585 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 TBC1D13Q9NVG8 400 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 PCDHA5Q9Y5H7 936 aa29.25■■■□□ 2.27
CCM2-211ENST00000478582 KIAA1671Q9BY89 1806 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 RECQL4O94761 1208 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 MLH1P40692 756 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 MATR3P43243 847 aaKnown RBP eCLIP29.24■■■□□ 2.27
CCM2-211ENST00000478582 AFF1P51825 1210 aaKnown RBP29.24■■■□□ 2.27
CCM2-211ENST00000478582 TFF2Q03403 129 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 THNSL1Q8IYQ7 743 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 GSTCDQ8NEC7 633 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 RMND1Q9NWS8 449 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 PLAGL2Q9UPG8 496 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 INPP5FQ9Y2H2 1132 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 GDAQ9Y2T3 454 aa29.24■■■□□ 2.27
CCM2-211ENST00000478582 TISP43B9A030 160 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 OGTO15294 1046 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 FAM189A1O60320 539 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 ADSSP30520 456 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 SMARCE1Q969G3 411 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 ZFP42Q96MM3 310 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 ACAP3Q96P50 834 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 MSTO1Q9BUK6 570 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 MIOSQ9NXC5 875 aa29.23■■■□□ 2.27
CCM2-211ENST00000478582 CLTAP09496 248 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 HARSP12081 509 aaKnown RBP29.22■■■□□ 2.27
CCM2-211ENST00000478582 GARTP22102 1010 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 YARSP54577 528 aaKnown RBP29.22■■■□□ 2.27
CCM2-211ENST00000478582 SNRPFP62306 86 aaKnown RBP29.22■■■□□ 2.27
CCM2-211ENST00000478582 XKR4Q5GH76 650 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 ALKAL1Q6UXT8 129 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 GBP3Q9H0R5 595 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 ALG13Q9NP73 1137 aaKnown RBP29.22■■■□□ 2.27
CCM2-211ENST00000478582 AAASQ9NRG9 546 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 TOPORSQ9NS56 1045 aaPredicted RBP29.22■■■□□ 2.27
CCM2-211ENST00000478582 KLK14Q9P0G3 267 aa29.22■■■□□ 2.27
CCM2-211ENST00000478582 LAG3P18627 525 aa29.21■■■□□ 2.27
CCM2-211ENST00000478582 OSTNP61366 133 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms