RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TFDP1Q14186 410 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 GPR162Q16538 588 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 EFCAB13Q8IY85 973 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 DNAJC18Q9H819 358 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 ELP3Q9H9T3 547 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 TBX20Q9UMR3 447 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 HEY1Q9Y5J3 304 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 HSD17B3P37058 310 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 NAA25Q14CX7 972 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 LONRF1Q17RB8 773 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 FYB2Q5VWT5 728 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SRLQ86TD4 932 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 NME8Q8N427 588 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 TSEN2Q8NCE0 465 aaKnown RBP11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.76□□□□□ -0.531e-14■□□□□ 8.5
COL27A1-204ENST00000477421 TAS2R14Q9NYV8 317 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 AIPL1Q9NZN9 384 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 FANCGO15287 622 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 EIF3BP55884 814 aaKnown RBP11.76□□□□□ -0.53
COL27A1-204ENST00000477421 ACTR2P61160 394 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 ITIH3Q06033 890 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 ORC1Q13415 861 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SLC29A2Q14542 456 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 AADACL2Q6P093 401 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 NLRP14Q86W24 1093 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 FBXO25Q8TCJ0 367 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 OLFML3Q9NRN5 406 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 TLR2O60603 784 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SAT1P21673 171 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 CIITAP33076 1130 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 IRX4P78413 519 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 AMPD2Q01433 879 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SH3BP5LQ7L8J4 393 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 TADA2BQ86TJ2 420 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 TATDN2Q93075 761 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SPATA33Q96N06 139 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 SMC6Q96SB8 1091 aa11.76□□□□□ -0.53
COL27A1-204ENST00000477421 RASA4BC9J798 803 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 CAPN9O14815 690 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 RASA4O43374 803 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 LSP1P33241 339 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 ATP11AP98196 1134 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 GPS1Q13098 491 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 NCOA4Q13772 614 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 EMC2Q15006 297 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 KYNUQ16719 465 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 DARS2Q6PI48 645 aaKnown RBP11.75□□□□□ -0.53
COL27A1-204ENST00000477421 TBC1D1Q86TI0 1168 aaPredicted RBP11.75□□□□□ -0.53
COL27A1-204ENST00000477421 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 ARHGEF26Q96DR7 871 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 CCT8L2Q96SF2 557 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 LDHAP00338 332 aaKnown RBP11.75□□□□□ -0.53
COL27A1-204ENST00000477421 ITGB5P18084 799 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 GBP1P32455 592 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 SV2AQ7L0J3 742 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 ETNPPLQ8TBG4 499 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 CCDC110Q8TBZ0 833 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 LRRC8CQ8TDW0 803 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 MKL1Q969V6 931 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 TSNARE1Q96NA8 513 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 ERP44Q9BS26 406 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 WNT8AQ9H1J5 351 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 GINM1Q9NU53 330 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 EIF3HO15372 352 aaKnown RBP eCLIP11.75□□□□□ -0.533e-15■■□□□ 12.5
COL27A1-204ENST00000477421 SUN1O94901 812 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 BRAFP15056 766 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 MAN1A1P33908 653 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 MDH1P40925 334 aaKnown RBP11.75□□□□□ -0.53
COL27A1-204ENST00000477421 SMTNL2Q2TAL5 461 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 LRRC31Q6UY01 552 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 CCNYQ8ND76 341 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 RILPQ96NA2 401 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 KCND2Q9NZV8 630 aa11.75□□□□□ -0.53
COL27A1-204ENST00000477421 SUCLA2Q9P2R7 463 aaPredicted RBP11.75□□□□□ -0.53
COL27A1-204ENST00000477421 GRAP2O75791 330 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PSMC1P62191 440 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 C1orf186Q6ZWK4 172 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ZC3H18Q86VM9 953 aaKnown RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 RBBP8NLQ8NC74 664 aaPredicted RBP11.74□□□□□ -0.53
COL27A1-204ENST00000477421 PYROXD1Q8WU10 500 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 P3H4Q92791 437 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 COMMD10Q9Y6G5 202 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 ATP9AO75110 1047 aa11.74□□□□□ -0.53
COL27A1-204ENST00000477421 SPAG7O75391 227 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms