RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ABLIM1O14639 778 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 ZC3H11AO75152 810 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX56-209ENST00000473924 SMC2O95347 1197 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 SCNN1GP51170 649 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
DDX56-209ENST00000473924 KYAT1Q16773 422 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 SEZ6Q53EL9 994 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 SLC39A4Q6P5W5 647 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 NELFCDQ8IXH7 590 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 POMGNT1Q8WZA1 660 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 GAS2L1Q99501 681 aaPredicted RBP13.56□□□□□ -0.24
DDX56-209ENST00000473924 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 IKZF4Q9H2S9 585 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 CWH43Q9H720 699 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 UBE4BO95155 1302 aa13.56□□□□□ -0.24
DDX56-209ENST00000473924 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 A0A0B4J269 797 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 TISP43B9A030 160 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 RFXAPO00287 272 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 OGTO15294 1046 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 RB1P06400 928 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 CLTAP09496 248 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 ALDH7A1P49419 539 aaKnown RBP13.55□□□□□ -0.24
DDX56-209ENST00000473924 STK4Q13043 487 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 GPM6BQ13491 265 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 KCNB1Q14721 858 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
DDX56-209ENST00000473924 COLGALT1Q8NBJ5 622 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 ZNF507Q8TCN5 953 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 SMARCE1Q969G3 411 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 ZNF558Q96NG5 402 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 C11orf84Q9BUA3 381 aaPredicted RBP13.55□□□□□ -0.24
DDX56-209ENST00000473924 HAPLN2Q9GZV7 340 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 AGO2Q9UKV8 859 aaKnown RBP13.55□□□□□ -0.24
DDX56-209ENST00000473924 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 RALGAPA2Q2PPJ7 1873 aa13.55□□□□□ -0.24
DDX56-209ENST00000473924 CARNS1A5YM72 827 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 C5orf67F2Z3F1 127 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
DDX56-209ENST00000473924 INPPL1O15357 1258 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 KIF20AO95235 890 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 THP07101 528 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 PBX3P40426 434 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 BCAR1P56945 870 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 GRIK3Q13003 919 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 ARMCX5Q6P1M9 558 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 HS2ST1Q7LGA3 356 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 ZNF280BQ86YH2 543 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 ELOA2Q8IYF1 753 aaPredicted RBP13.54□□□□□ -0.24
DDX56-209ENST00000473924 KIAA0895Q8NCT3 520 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 GDPD5Q8WTR4 605 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
DDX56-209ENST00000473924 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 ERCC4Q92889 916 aaPredicted RBP13.54□□□□□ -0.24
DDX56-209ENST00000473924 GSDMAQ96QA5 445 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 CDX2Q99626 313 aaPredicted RBP13.54□□□□□ -0.24
DDX56-209ENST00000473924 NRDE2Q9H7Z3 1164 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 RPF1Q9H9Y2 349 aaKnown RBP13.54□□□□□ -0.24
DDX56-209ENST00000473924 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 MIOSQ9NXC5 875 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 PCDHA5Q9Y5H7 936 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 STYXL1Q9Y6J8 313 aa13.54□□□□□ -0.24
DDX56-209ENST00000473924 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 EPOPA6NHQ4 379 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 NT5C1B-RDH14C9J2C7 533 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 H3BNC9 293 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 DDHD2O94830 711 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
DDX56-209ENST00000473924 ALDH2P05091 517 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 GARTP22102 1010 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 IGFBP4P22692 258 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 ADSSP30520 456 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 PPM1AP35813 382 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 TNFSF9P41273 254 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 OR1G1P47890 313 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 ACOT2P49753 483 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 PPP2R3AQ06190 1150 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 KNOP1Q1ED39 458 aaKnown RBP13.53□□□□□ -0.24
DDX56-209ENST00000473924 GLRA4Q5JXX5 417 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 GSTCDQ8NEC7 633 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 P2RX5Q93086 422 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 SNX27Q96L92 541 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 GUCD1Q96NT3 240 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 TMEM175Q9BSA9 504 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 PCIF1Q9H4Z3 704 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 ALG13Q9NP73 1137 aaKnown RBP13.53□□□□□ -0.24
DDX56-209ENST00000473924 SPG21Q9NZD8 308 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
DDX56-209ENST00000473924 TDRD15B5MCY1 1934 aaKnown RBP13.52□□□□□ -0.24
DDX56-209ENST00000473924 PTGESO14684 152 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms