RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ELF3P78545 371 aaPredicted RBP22.64■■□□□ 1.22
COL18A1-207ENST00000473212 SLMAPQ14BN4 828 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 LLGL2Q6P1M3 1020 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 HAUS6Q7Z4H7 955 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 CD101Q93033 1021 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 TMEM109Q9BVC6 243 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 TRIM7Q9C029 511 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 MCM8Q9UJA3 840 aa22.64■■□□□ 1.22
COL18A1-207ENST00000473212 SPOPO43791 374 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 MGRN1O60291 552 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 MXI1P50539 228 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 FKBP1AP62942 108 aaKnown RBP22.64■■□□□ 1.21
COL18A1-207ENST00000473212 NEDD9Q14511 834 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 E2F5Q15329 346 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 C2CD6Q53TS8 623 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 DAB2IPQ5VWQ8 1189 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 AKT1S1Q96B36 256 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 LARSQ9P2J5 1176 aaKnown RBP22.64■■□□□ 1.21
COL18A1-207ENST00000473212 MTUS1Q9ULD2 1270 aa22.64■■□□□ 1.21
COL18A1-207ENST00000473212 ZNFX1Q9P2E3 1918 aaKnown RBP22.64■■□□□ 1.21
COL18A1-207ENST00000473212 ADSSP30520 456 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 FMO1Q01740 532 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CNGA2Q16280 664 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CROCCP2Q86T23 111 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 GIMAP7Q8NHV1 300 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 NUP85Q9BW27 656 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 TAOK3Q9H2K8 898 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CCDC134Q9H6E4 229 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CCPG1Q9ULG6 757 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 SLC12A4Q9UP95 1085 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 ZNF536O15090 1300 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 SPDYE2BA6NHP3 402 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 SPDYE6P0CI01 402 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 MRPS9P82933 396 aaKnown RBP22.63■■□□□ 1.21
COL18A1-207ENST00000473212 SIX1Q15475 284 aaPredicted RBP22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CYP1B1Q16678 543 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 FAM133BQ5BKY9 247 aaKnown RBP22.63■■□□□ 1.21
COL18A1-207ENST00000473212 XXYLT1Q8NBI6 393 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 ZNF564Q8TBZ8 553 aaPredicted RBP22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CHURC1Q8WUH1 139 aa22.63■■□□□ 1.21
COL18A1-207ENST00000473212 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.63■■□□□ 1.21
COL18A1-207ENST00000473212 CNTNAP1P78357 1384 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 PASKQ96RG2 1323 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 H0YIN7 160 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 LONRF1Q17RB8 773 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 TNFAIP8L3Q5GJ75 292 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 EXOC3L1Q86VI1 746 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 DDX23Q9BUQ8 820 aaKnown RBP22.62■■□□□ 1.21
COL18A1-207ENST00000473212 STMN4Q9H169 189 aaPredicted RBP22.62■■□□□ 1.21
COL18A1-207ENST00000473212 DNAJC17Q9NVM6 304 aaKnown RBP22.62■■□□□ 1.21
COL18A1-207ENST00000473212 HERC5Q9UII4 1024 aaKnown RBP22.62■■□□□ 1.21
COL18A1-207ENST00000473212 BRWD3Q6RI45 1802 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 ATP9AO75110 1047 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 MUTP22033 750 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 LRRC14Q15048 493 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 OTUD6AQ7L8S5 288 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 TRPM8Q7Z2W7 1104 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 MGARPQ8TDB4 240 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 ACCSQ96QU6 501 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 ZNF70Q9UC06 446 aaPredicted RBP22.62■■□□□ 1.21
COL18A1-207ENST00000473212 CD2APQ9Y5K6 639 aa22.62■■□□□ 1.21
COL18A1-207ENST00000473212 DLATP10515 647 aaKnown RBP22.61■■□□□ 1.21
COL18A1-207ENST00000473212 PLS3P13797 630 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 SNX1Q13596 522 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 MYBPC2Q14324 1141 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 RNF207Q6ZRF8 634 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 CYFIP1Q7L576 1253 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 TAOK1Q7L7X3 1001 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 FAM71AQ8IYT1 594 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 CCDC63Q8NA47 563 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 C1orf54Q8WWF1 131 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 PI4K2AQ9BTU6 479 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 ABCF3Q9NUQ8 709 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 CLDN3O15551 220 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 MTA2O94776 668 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 P4HBP07237 508 aaKnown RBP22.61■■□□□ 1.21
COL18A1-207ENST00000473212 EIF2AK2P19525 551 aaKnown RBP22.61■■□□□ 1.21
COL18A1-207ENST00000473212 RASA3Q14644 834 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 MAGEC3Q8TD91 643 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 ZNF653Q96CK0 615 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 RIT2Q99578 217 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 HERPUD2Q9BSE4 406 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 BAIAP2L1Q9UHR4 511 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 USP20Q9Y2K6 914 aa22.61■■□□□ 1.21
COL18A1-207ENST00000473212 ACSL3O95573 720 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 ATP6V1G2O95670 118 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 YWHABP31946 246 aaKnown RBP22.6■■□□□ 1.21
COL18A1-207ENST00000473212 CALCOCO2Q13137 446 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 TKFCQ3LXA3 575 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 TAS1R2Q8TE23 839 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 MORC4Q8TE76 937 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 RUNDC3BQ96NL0 473 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 CDC42EP4Q9H3Q1 356 aaKnown RBP22.6■■□□□ 1.21
COL18A1-207ENST00000473212 GGT7Q9UJ14 662 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 TELO2Q9Y4R8 837 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 C21orf2O43822 256 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 ECEL1O95672 775 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 GSTA1P08263 222 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 GZMAP12544 262 aa22.6■■□□□ 1.21
COL18A1-207ENST00000473212 NF2P35240 595 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms