RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ANKFY1Q9P2R3 1169 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 TBX22Q9Y458 520 aa6.62□□□□□ -1.35
CD46-213ENST00000471987 NUDT3O95989 172 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 CANXP27824 592 aaKnown RBP6.61□□□□□ -1.35
CD46-213ENST00000471987 PDCD4Q53EL6 469 aaKnown RBP6.61□□□□□ -1.35
CD46-213ENST00000471987 FAM47AQ5JRC9 791 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 MFSD14BQ5SR56 506 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 DPY19L2P1Q6NXN4 242 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 FAM180AQ6UWF9 173 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 Q6YL49 198 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 LCORLQ8N3X6 602 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 RNF169Q8NCN4 708 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 SUPT20HQ8NEM7 779 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 SLKQ9H2G2 1235 aaPredicted RBP6.61□□□□□ -1.35
CD46-213ENST00000471987 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 EDARQ9UNE0 448 aa6.61□□□□□ -1.35
CD46-213ENST00000471987 ZNF185O15231 689 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 PJA2O43164 708 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 AKR1B10O60218 316 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 PTPN7P35236 360 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 SOX5P35711 763 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 AVPR1BP47901 424 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 MRPS9P82933 396 aaKnown RBP6.6□□□□□ -1.35
CD46-213ENST00000471987 CDK17Q00537 523 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 GUCY1B3Q02153 619 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 CPEB3Q8NE35 698 aaKnown RBP6.6□□□□□ -1.35
CD46-213ENST00000471987 GPR156Q8NFN8 814 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 RIOX1Q9H6W3 641 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 ZNHIT2Q9UHR6 403 aa6.6□□□□□ -1.35
CD46-213ENST00000471987 ADCY6O43306 1168 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 BRINP1O60477 761 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 SNRPA1P09661 255 aaKnown RBP6.59□□□□□ -1.35
CD46-213ENST00000471987 MTHFD2P13995 350 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD46-213ENST00000471987 CLRN1P58418 232 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 MXRA7P84157 204 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 ATXN7L2Q5T6C5 722 aaPredicted RBP6.59□□□□□ -1.35
CD46-213ENST00000471987 FAM102AQ5T9C2 384 aaPredicted RBP6.59□□□□□ -1.35
CD46-213ENST00000471987 OR7D4Q8NG98 312 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 AUTS2Q8WXX7 1259 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 RIN2Q8WYP3 895 aaPredicted RBP6.59□□□□□ -1.35
CD46-213ENST00000471987 FATE1Q969F0 183 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 TEX101Q9BY14 249 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 CAAP1Q9H8G2 361 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 BCO1Q9HAY6 547 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 USP15Q9Y4E8 981 aaPredicted RBP6.59□□□□□ -1.35
CD46-213ENST00000471987 FPGT-TNNI3KV9GXZ4 949 aa6.59□□□□□ -1.35
CD46-213ENST00000471987 ZAR1LA6NP61 321 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 GOLGA8AA7E2F4 631 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 ECHS1P30084 290 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 ADSLP30566 484 aaPredicted RBP6.58□□□□□ -1.36
CD46-213ENST00000471987 ARMC6Q6NXE6 501 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 OLFML1Q6UWY5 402 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 ZNF572Q7Z3I7 529 aaPredicted RBP6.58□□□□□ -1.36
CD46-213ENST00000471987 CMTR2Q8IYT2 770 aaKnown RBP6.58□□□□□ -1.36
CD46-213ENST00000471987 TRMT2AQ8IZ69 625 aaKnown RBP6.58□□□□□ -1.36
CD46-213ENST00000471987 UBR7Q8N806 425 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 SLC35B2Q8TB61 432 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 COQ10AQ96MF6 247 aa6.58□□□□□ -1.36
CD46-213ENST00000471987 DRGXA6NNA5 263 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 CXorf49A8MYA2 514 aaPredicted RBP6.57□□□□□ -1.36
CD46-213ENST00000471987 TGM1P22735 817 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 CHN2P52757 468 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 BLOC1S1P78537 153 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 ADRM1Q16186 407 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 MUM1Q2TAK8 710 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 METRNLQ641Q3 311 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 STRA8Q7Z7C7 330 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 REPS2Q8NFH8 660 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 TSPEARQ8WU66 669 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 LMBR1Q8WVP7 490 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 QRSL1Q9H0R6 528 aaKnown RBP6.57□□□□□ -1.36
CD46-213ENST00000471987 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 SYBUQ9NX95 663 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
CD46-213ENST00000471987 TLDC2A0PJX2 215 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 PIPSLA2A3N6 862 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 UNC119BA6NIH7 251 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 MARCH11A6NNE9 402 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 HKR1P10072 659 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
CD46-213ENST00000471987 FAPQ12884 760 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 SP140Q13342 867 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 ANO4Q32M45 955 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 MUM1L1Q5H9M0 696 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 RRP12Q5JTH9 1297 aaKnown RBP6.56□□□□□ -1.36
CD46-213ENST00000471987 STRIP1Q5VSL9 837 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 ABHD17BQ5VST6 288 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 AGAP9Q5VTM2 703 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 Q6ZVL8 140 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 RHOT2Q8IXI1 618 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 TGFBRAP1Q8WUH2 860 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 CHAC2Q8WUX2 184 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 CAVIN3Q969G5 261 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 UHRF1Q96T88 793 aaPredicted RBP6.56□□□□□ -1.36
CD46-213ENST00000471987 GREM2Q9H772 168 aa6.56□□□□□ -1.36
CD46-213ENST00000471987 RBM12Q9NTZ6 932 aaKnown RBP6.56□□□□□ -1.36
CD46-213ENST00000471987 CFIP05156 583 aa6.55□□□□□ -1.36
CD46-213ENST00000471987 ALOX15P16050 662 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms