RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 PRDM12Q9H4Q4 367 aa27.55■■■□□ 2
COL15A1-203ENST00000471477 RWDD3Q9Y3V2 267 aa27.55■■■□□ 2
COL15A1-203ENST00000471477 ZMYM2Q9UBW7 1377 aa27.54■■■□□ 2
COL15A1-203ENST00000471477 INPPL1O15357 1258 aa27.54■■■□□ 2
COL15A1-203ENST00000471477 POMCP01189 267 aa27.54■■■□□ 2
COL15A1-203ENST00000471477 SCNN1GP51170 649 aa27.54■■■□□ 2
COL15A1-203ENST00000471477 CCDC94Q9BW85 323 aaPredicted RBP27.54■■■□□ 2
COL15A1-203ENST00000471477 TMEM206Q9H813 350 aa27.54■■■□□ 2
COL15A1-203ENST00000471477 MIOSQ9NXC5 875 aa27.54■■■□□ 2
COL15A1-203ENST00000471477 BMPR1AP36894 532 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 RNASELQ05823 741 aaKnown RBP27.53■■■□□ 2
COL15A1-203ENST00000471477 STK4Q13043 487 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 SEZ6Q53EL9 994 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 KIAA0895Q8NCT3 520 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 FBXO22Q8NEZ5 403 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 CCDC47Q96A33 483 aaKnown RBP27.53■■■□□ 2
COL15A1-203ENST00000471477 RPS6KC1Q96S38 1066 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 UBE4BO95155 1302 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 PDCD11Q14690 1871 aaKnown RBP27.53■■■□□ 2
COL15A1-203ENST00000471477 PLXNA4Q9HCM2 1894 aa27.53■■■□□ 2
COL15A1-203ENST00000471477 RFXAPO00287 272 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 HOXD13P35453 343 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 PSMD2Q13200 908 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 GSTCDQ8NEC7 633 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 ZNF507Q8TCN5 953 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 SCFD1Q8WVM8 642 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 ERCC4Q92889 916 aaPredicted RBP27.52■■■□□ 2
COL15A1-203ENST00000471477 GUCD1Q96NT3 240 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 MSTO1Q9BUK6 570 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 GBP3Q9H0R5 595 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 CXCL16Q9H2A7 254 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 LMBRD1Q9NUN5 540 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 KANSL3Q9P2N6 904 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 HOOK1Q9UJC3 728 aaKnown RBP27.52■■■□□ 2
COL15A1-203ENST00000471477 STYXL1Q9Y6J8 313 aa27.52■■■□□ 2
COL15A1-203ENST00000471477 A0A0B4J269 797 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 RHOBTB3O94955 611 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 LAG3P18627 525 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 SLFN12LQ6IEE8 588 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 ZNF280BQ86YH2 543 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 COLGALT1Q8NBJ5 622 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 GDPD5Q8WTR4 605 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 ACAP3Q96P50 834 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 NRDE2Q9H7Z3 1164 aa27.51■■□□□ 1.99
COL15A1-203ENST00000471477 C5orf67F2Z3F1 127 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 OGTO15294 1046 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 FAM189A1O60320 539 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 B4GALT3O60512 393 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 ZC3H11AO75152 810 aaKnown RBP eCLIP27.5■■□□□ 1.99
COL15A1-203ENST00000471477 PBX3P40426 434 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 YARSP54577 528 aaKnown RBP27.5■■□□□ 1.99
COL15A1-203ENST00000471477 KCNB1Q14721 858 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 NELFCDQ8IXH7 590 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 ELOA2Q8IYF1 753 aaPredicted RBP27.5■■□□□ 1.99
COL15A1-203ENST00000471477 POMGNT1Q8WZA1 660 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 AAASQ9NRG9 546 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 PLAGL2Q9UPG8 496 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 PTGESO14684 152 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 DDHD2O94830 711 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 ADSSP30520 456 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 BMT2Q1RMZ1 405 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 ZBTB41Q5SVQ8 909 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 FAM193BQ96PV7 902 aaPredicted RBP27.5■■□□□ 1.99
COL15A1-203ENST00000471477 CDX2Q99626 313 aaPredicted RBP27.5■■□□□ 1.99
COL15A1-203ENST00000471477 PLVAPQ9BX97 442 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 TOPORSQ9NS56 1045 aaPredicted RBP27.5■■□□□ 1.99
COL15A1-203ENST00000471477 DNAJB4Q9UDY4 337 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 PCDHB12Q9Y5F1 795 aa27.5■■□□□ 1.99
COL15A1-203ENST00000471477 ANK1P16157 1881 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 TRANK1O15050 2925 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 RB1P06400 928 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 TNFSF9P41273 254 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 GRIK3Q13003 919 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 KCNT2Q6UVM3 1135 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 MYLIPQ8WY64 445 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 SNX27Q96L92 541 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 ZNF558Q96NG5 402 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 AGO2Q9UKV8 859 aaKnown RBP27.49■■□□□ 1.99
COL15A1-203ENST00000471477 PCDHA5Q9Y5H7 936 aa27.49■■□□□ 1.99
COL15A1-203ENST00000471477 ATG2AQ2TAZ0 1938 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 GOLGA6L22H0YM25 854 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 H3BNC9 293 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 MEFVO15553 781 aaPredicted RBP27.48■■□□□ 1.99
COL15A1-203ENST00000471477 SMC2O95347 1197 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 CLTAP09496 248 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 BCAR1P56945 870 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 GPM6BQ13491 265 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 KYAT1Q16773 422 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 GLRA4Q5JXX5 417 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 KLHL23Q8NBE8 558 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 SMARCE1Q969G3 411 aa27.48■■□□□ 1.99
COL15A1-203ENST00000471477 C11orf84Q9BUA3 381 aaPredicted RBP27.48■■□□□ 1.99
COL15A1-203ENST00000471477 CXCL8P10145 99 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 GARTP22102 1010 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 ARMCX5Q6P1M9 558 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 ALKAL1Q6UXT8 129 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 SPATA20Q8TB22 786 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 P2RX5Q93086 422 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 CBWD1Q9BRT8 395 aa27.47■■□□□ 1.99
COL15A1-203ENST00000471477 NT5C1B-RDH14C9J2C7 533 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms