RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CDY2AQ9Y6F7 541 aa16.43■□□□□ 0.22
COL4A5-203ENST00000470339 SQORQ9Y6N5 450 aa16.43■□□□□ 0.22
COL4A5-203ENST00000470339 LRRIQ3A6PVS8 624 aaPredicted RBP16.42■□□□□ 0.22
COL4A5-203ENST00000470339 NRDCO43847 1150 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 SGPL1O95470 568 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 CHRNA1P02708 482 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 PON1P27169 355 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 DLG4P78352 724 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 MYL7Q01449 175 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 PPP3CAQ08209 521 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 ARID5BQ14865 1188 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
COL4A5-203ENST00000470339 SLC27A1Q6PCB7 646 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 CCDC155Q8N6L0 562 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 TC2NQ8N9U0 490 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 CCDC112Q8NEF3 446 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 ZNF397Q8NF99 534 aaPredicted RBP16.42■□□□□ 0.22
COL4A5-203ENST00000470339 CACTINQ8WUQ7 758 aaKnown RBP16.42■□□□□ 0.22
COL4A5-203ENST00000470339 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 CCDC127Q96BQ5 260 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 FNBP1Q96RU3 617 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 FBXL5Q9UKA1 691 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
COL4A5-203ENST00000470339 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
COL4A5-203ENST00000470339 TTC26A0AVF1 554 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 MFAP3LO75121 409 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 IL18RAPO95256 599 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CASP14P31944 242 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 THPOP40225 353 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 FXR1P51114 621 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL4A5-203ENST00000470339 ZBED6P86452 979 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 KRT39Q6A163 491 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 FAM43BQ6ZT52 329 aaPredicted RBP16.41■□□□□ 0.22
COL4A5-203ENST00000470339 USP38Q8NB14 1042 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 EHBP1Q8NDI1 1231 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 WNT8BQ93098 351 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 NUCKS1Q9H1E3 243 aaKnown RBP16.41■□□□□ 0.22
COL4A5-203ENST00000470339 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CHST12Q9NRB3 414 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 TRMT13Q9NUP7 481 aaKnown RBP16.41■□□□□ 0.22
COL4A5-203ENST00000470339 CEP72Q9P209 647 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 RALGAPA2Q2PPJ7 1873 aa16.41■□□□□ 0.22
COL4A5-203ENST00000470339 B4GALT4O60513 344 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 NOL4O94818 638 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 HARSP12081 509 aaKnown RBP16.4■□□□□ 0.22
COL4A5-203ENST00000470339 KRT9P35527 623 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 GRM5P41594 1212 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 GCLMP48507 274 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 KLK7P49862 253 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 MXI1P50539 228 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 DPY19L2P1Q6NXN4 242 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 WDR49Q8IV35 697 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 ANKLE1Q8NAG6 615 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 CPLX3Q8WVH0 158 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 DHX38Q92620 1227 aaKnown RBP16.4■□□□□ 0.22
COL4A5-203ENST00000470339 CRACR2AQ9BSW2 395 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
COL4A5-203ENST00000470339 TMEM117Q9H0C3 514 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 RPF1Q9H9Y2 349 aaKnown RBP16.4■□□□□ 0.22
COL4A5-203ENST00000470339 PDE11AQ9HCR9 933 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 FAM207AQ9NSI2 230 aaPredicted RBP16.4■□□□□ 0.22
COL4A5-203ENST00000470339 GCNT4Q9P109 453 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
COL4A5-203ENST00000470339 TRIP11Q15643 1979 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 MROH7Q68CQ1 1323 aa16.4■□□□□ 0.22
COL4A5-203ENST00000470339 GPR182O15218 404 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 RPS6KA5O75582 802 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 STAG3L1P0CL83 205 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 SLC9A1P19634 815 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 FGFR4P22455 802 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 RFX1P22670 979 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 FECHP22830 423 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 TNFSF9P41273 254 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 ENOX2Q16206 610 aaKnown RBP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 EPC2Q52LR7 807 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 TRIM65Q6PJ69 517 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 SV2AQ7L0J3 742 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 FAM228AQ86W67 206 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 CD302Q8IX05 232 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 THNSL1Q8IYQ7 743 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 LMO3Q8TAP4 145 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 CAGE1Q8TC20 777 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
COL4A5-203ENST00000470339 DNAJC7Q99615 494 aa16.39■□□□□ 0.21
COL4A5-203ENST00000470339 NAA15Q9BXJ9 866 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms