RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-209	ENST00000470083	SF3A2	Q15428	464 aa	Known RBP	13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	STPG1	Q5TH74	334 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	TANGO2	Q6ICL3	276 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	LONP2	Q86WA8	852 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	EXOC6	Q8TAG9	804 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	SLC7A14	Q8TBB6	771 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	ING5	Q8WYH8	240 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	PIK3R5	Q8WYR1	880 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	FAM3C	Q92520	227 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	LSM14B	Q9BX40	385 aa	Known RBP	13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	UNC45A	Q9H3U1	944 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	HCFC1R1	Q9NWW0	138 aa		13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	DNMT3B	Q9UBC3	853 aa	Known RBP	13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	MRPS23	Q9Y3D9	190 aa	Known RBP	13.42	□□□□□ -0.26
LSM2-209	ENST00000470083	DOCK6	Q96HP0	2047 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	DSP	P15924	2871 aa	Known RBP	13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	ESYT2	A0FGR8	921 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	ZNF806	P0C7X5	589 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	GAS6	Q14393	721 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	UVSSA	Q2YD98	709 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	LRCH2	Q5VUJ6	765 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	SYNE3	Q6ZMZ3	975 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	RTL10	Q7L3V2	364 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	REXO1	Q8N1G1	1221 aa	Known RBP	13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	SPEM1	Q8N4L4	309 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	SLC5A5	Q92911	643 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	CCDC51	Q96ER9	411 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	MCRS1	Q96EZ8	462 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	TTPAL	Q9BTX7	342 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	TEKT3	Q9BXF9	490 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	EIF2A	Q9BY44	585 aa	Known RBP	13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	BRD9	Q9H8M2	597 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	TRPV5	Q9NQA5	729 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	RXFP3	Q9NSD7	469 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	GIT1	Q9Y2X7	761 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	HES2	Q9Y543	173 aa		13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	RBM8A	Q9Y5S9	174 aa	Known RBP	13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	FLNB	O75369	2602 aa	Known RBP	13.41	□□□□□ -0.26
LSM2-209	ENST00000470083	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.41	□□□□□ -0.26
LSM2-209	ENST00000470083		K7ESF4	209 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	ADAMTS3	O15072	1205 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	SGSM2	O43147	1006 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	TADA2A	O75478	443 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	CHRNB1	P11230	501 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	FCAR	P24071	287 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	CHML	P26374	656 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	PSMD5	Q16401	504 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	RTN1	Q16799	776 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	SLC5A9	Q2M3M2	681 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	PSAPL1	Q6NUJ1	521 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	NOTUM	Q6P988	496 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	APOA5	Q6Q788	366 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	LRSAM1	Q6UWE0	723 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	ANO5	Q75V66	913 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	CEP68	Q76N32	757 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	MIER3	Q7Z3K6	550 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	GSTCD	Q8NEC7	633 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	LNX1	Q8TBB1	728 aa	Predicted RBP	13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	PSPC1	Q8WXF1	523 aa	Known RBP	13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	IRF7	Q92985	503 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	LOXL4	Q96JB6	756 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	LRRC2	Q9BYS8	371 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	ZMYND12	Q9H0C1	365 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	AVEN	Q9NQS1	362 aa	Predicted RBP	13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	PIAS3	Q9Y6X2	628 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	DMXL2	Q8TDJ6	3036 aa		13.4	□□□□□ -0.26
LSM2-209	ENST00000470083	LAMA1	P25391	3075 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	SMG1	Q96Q15	3661 aa	Known RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	SRRM3	A6NNA2	597 aa	Predicted RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	DDX11L8	A8MPP1	907 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	ADAM12	O43184	909 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	ERLIN2	O94905	339 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	RHO	P08100	348 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	SRGAP2C	P0DJJ0	459 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	GSPT1	P15170	499 aa	Known RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	AXL	P30530	894 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	HOXA6	P31267	233 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	GRIK3	Q13003	919 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	GRM2	Q14416	872 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.39	□□□□□ -0.27	2e-6	■■■□□ 19.2
LSM2-209	ENST00000470083	POTEH	Q6S545	545 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	MAP4K3	Q8IVH8	894 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	HACE1	Q8IYU2	909 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	PRPF31	Q8WWY3	499 aa	Known RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	SLC7A3	Q8WY07	619 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	RABGGTA	Q92696	567 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	TRMT61B	Q9BVS5	477 aa	Known RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	RWDD1	Q9H446	243 aa	Predicted RBP	13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	C6orf50	Q9HD87	102 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	WASF3	Q9UPY6	502 aa		13.39	□□□□□ -0.27
LSM2-209	ENST00000470083	ZMYM2	Q9UBW7	1377 aa		13.38	□□□□□ -0.27
LSM2-209	ENST00000470083	TSPAN1	O60635	241 aa		13.38	□□□□□ -0.27
LSM2-209	ENST00000470083	ABCB7	O75027	752 aa		13.38	□□□□□ -0.27
LSM2-209	ENST00000470083	PSMD10	O75832	226 aa		13.38	□□□□□ -0.27
LSM2-209	ENST00000470083	CEBPB	P17676	345 aa		13.38	□□□□□ -0.27
LSM2-209	ENST00000470083	RING1	Q06587	406 aa		13.38	□□□□□ -0.27
LSM2-209	ENST00000470083	LAMTOR4	Q0VGL1	99 aa		13.38	□□□□□ -0.27

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