RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PTGESO14684 152 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 CLDN3O15551 220 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 TOM1L1O75674 476 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 FGF18O76093 207 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 RB1P06400 928 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 GALTP07902 379 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 MCF2P10911 925 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 LAG3P18627 525 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 IRS1P35568 1242 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 TNFSF9P41273 254 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 GRM5P41594 1212 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 SPAG1Q07617 926 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 MCL1Q07820 350 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 SNW1Q13573 536 aaKnown RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 CAMK1Q14012 370 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
CUX1-207ENST00000465461 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 L1TD1Q5T7N2 865 aaKnown RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 CNNM4Q6P4Q7 775 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 MAP4K3Q8IVH8 894 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 FMR1NBQ8N0W7 255 aaPredicted RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 ENGASEQ8NFI3 743 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 MAFAQ8NHW3 353 aaPredicted RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 SPPL3Q8TCT6 385 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 BCL7CQ8WUZ0 217 aaPredicted RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 ERCC4Q92889 916 aaPredicted RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 ZNF558Q96NG5 402 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 C11orf84Q9BUA3 381 aaPredicted RBP12.76□□□□□ -0.37
CUX1-207ENST00000465461 ST6GALNAC4Q9H4F1 302 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 AAASQ9NRG9 546 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 OLFML3Q9NRN5 406 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 SEL1LQ9UBV2 794 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 RWDD3Q9Y3V2 267 aa12.76□□□□□ -0.37
CUX1-207ENST00000465461 CHD9Q3L8U1 2897 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 PRPF40AO75400 957 aaKnown RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 NR1I2O75469 434 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 PIGRP01833 764 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 IGFBP6P24592 240 aaPredicted RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 HOXD13P35453 343 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 OR1G1P47890 313 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 ALDH7A1P49419 539 aaKnown RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 EHHADHQ08426 723 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 COLGALT2Q8IYK4 626 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 SLC39A11Q8N1S5 342 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 KCNN1Q92952 543 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 ACAP3Q96P50 834 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 ACCSQ96QU6 501 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 RPS6KC1Q96S38 1066 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 PAAF1Q9BRP4 392 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 USP25Q9UHP3 1055 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 PRG3Q9Y2Y8 225 aaPredicted RBP12.75□□□□□ -0.37
CUX1-207ENST00000465461 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
CUX1-207ENST00000465461 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
CUX1-207ENST00000465461 PVALEFA0A1B0GWK0 134 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 NRP1O14786 923 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 INPPL1O15357 1258 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
CUX1-207ENST00000465461 ALDH2P05091 517 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 CXCL8P10145 99 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 ADSSP30520 456 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 ACOT2P49753 483 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 ERVFC1P60507 584 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 DPYDQ12882 1025 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 STK4Q13043 487 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 PNOCQ13519 176 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 SLC10A6Q3KNW5 377 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 APBB1IPQ7Z5R6 666 aaPredicted RBP12.74□□□□□ -0.37
CUX1-207ENST00000465461 SYCP3Q8IZU3 236 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 SLC17A8Q8NDX2 589 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 P2RX5Q93086 422 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 ZMAT2Q96NC0 199 aaKnown RBP12.74□□□□□ -0.37
CUX1-207ENST00000465461 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 PCIF1Q9H4Z3 704 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 SPG21Q9NZD8 308 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 TRIP11Q15643 1979 aa12.74□□□□□ -0.37
CUX1-207ENST00000465461 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 ATG2AQ2TAZ0 1938 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 A0A0B4J269 797 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 SMIM28A0A1B0GU29 152 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 FAM189A1O60320 539 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 SLC34A2O95436 690 aa12.73□□□□□ -0.37
CUX1-207ENST00000465461 THP07101 528 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms