RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
CNKSR1-203ENST00000465415 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
CNKSR1-203ENST00000465415 SEL1LQ9UBV2 794 aa13.76□□□□□ -0.21
CNKSR1-203ENST00000465415 TBX20Q9UMR3 447 aa13.76□□□□□ -0.21
CNKSR1-203ENST00000465415 FAN1Q9Y2M0 1017 aa13.76□□□□□ -0.21
CNKSR1-203ENST00000465415 PRG3Q9Y2Y8 225 aaPredicted RBP13.76□□□□□ -0.21
CNKSR1-203ENST00000465415 PTGESO14684 152 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 NRP1O14786 923 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 FSCN2O14926 492 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 CLDN3O15551 220 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 NCK2O43639 380 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 PIGRP01833 764 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 ALDH2P05091 517 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 OSTNP61366 133 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 TFF2Q03403 129 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 AAK1Q2M2I8 961 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 EP400NLQ6ZTU2 488 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 TMC7Q7Z402 723 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 MAP4K3Q8IVH8 894 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 STAMQ92783 540 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 PABPC5Q96DU9 382 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 SCAND2PQ9GZW5 306 aaPredicted RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 ST6GALNAC4Q9H4F1 302 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 MRPL44Q9H9J2 332 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 KBTBD4Q9NVX7 518 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
CNKSR1-203ENST00000465415 THP07101 528 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 KCNA5P22460 613 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 CA8P35219 290 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 NRIP1P48552 1158 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 GTF2BQ00403 316 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 AMPD3Q01432 767 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 MCL1Q07820 350 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 TUSC3Q13454 348 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 COL19A1Q14993 1142 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 HERC4Q5GLZ8 1057 aaPredicted RBP13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 GLRA4Q5JXX5 417 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 DDX53Q86TM3 631 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 RBM23Q86U06 439 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 CCDC65Q8IXS2 484 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 VPS52Q8N1B4 723 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 HVCN1Q96D96 273 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 ZBTB45Q96K62 511 aaPredicted RBP13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 SNX27Q96L92 541 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 ASB2Q96Q27 587 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 ZBP1Q9H171 429 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 IGFLR1Q9H665 355 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 TLE6Q9H808 572 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 OLFML3Q9NRN5 406 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 MARCH5Q9NX47 278 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 STK39Q9UEW8 545 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 KCNH3Q9ULD8 1083 aa13.74□□□□□ -0.21
CNKSR1-203ENST00000465415 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 FRMD3A2A2Y4 597 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 CASTOR2A6NHX0 329 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 GCNT3O95395 438 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 ASIC1P78348 528 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 ZC2HC1CQ53FD0 456 aaPredicted RBP13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 ADALQ6DHV7 355 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 ZNF720Q7Z2F6 126 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 ACAP3Q96P50 834 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 TRIM9Q9C026 710 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 CXCL16Q9H2A7 254 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
CNKSR1-203ENST00000465415 XIRP2A4UGR9 3374 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 HIDE1A8MVS5 230 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 F8W810 466 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 PER2O15055 1255 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 LINC01565O15544 149 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 PPP1R37O75864 691 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 CTSAP10619 480 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 PFKFB1P16118 471 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 CMA1P23946 247 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 NDUFV1P49821 464 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 KCNQ1P51787 676 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 COASYQ13057 564 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 ALCAMQ13740 583 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 DUSP6Q16828 381 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 SEZ6Q53EL9 994 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 SLC39A4Q6P5W5 647 aa13.72□□□□□ -0.21
CNKSR1-203ENST00000465415 CEP57L1Q8IYX8 460 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms