RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 DEFB128Q7Z7B8 93 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 CCDC51Q96ER9 411 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 MSTO1Q9BUK6 570 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 SRRTQ9BXP5 876 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 EIF2AQ9BY44 585 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 HSPBP1Q9NZL4 362 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 AGO2Q9UKV8 859 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 R3HCC1Q9Y3T6 440 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 ITIH6Q6UXX5 1313 aa18.43■□□□□ 0.54
EXOSC3-203ENST00000465229 CEP290O15078 2479 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 CSF2RAP15509 400 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 ZSCAN20P17040 1043 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 EEF1GP26641 437 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 RFC2P35250 354 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 TCTN1Q2MV58 587 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 TCP11X2Q5H9J9 407 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 TWF2Q6IBS0 349 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 RTN4RL1Q86UN2 441 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 TMEM199Q8N511 208 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 SEPT8Q92599 483 aa18.42■□□□□ 0.54
EXOSC3-203ENST00000465229 CETN3O15182 167 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 FAM189A1O60320 539 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 TPM2P07951 284 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 MCF2P10911 925 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 HARSP12081 509 aaKnown RBP18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 CASP4P49662 377 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 KRT31Q15323 416 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 XXYLT1Q8NBI6 393 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 SAAL1Q96ER3 474 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 ADAM2Q99965 735 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 ADPGKQ9BRR6 497 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 GOLGA8IPA6NC78 632 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 GOLGA8JA6NMD2 632 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 KCNJ18B7U540 433 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 OGTO15294 1046 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 CCP110O43303 1012 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 EXOC3O60645 756 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 NPTXRO95502 500 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 KCNJ12Q14500 433 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 DCAF4L1Q3SXM0 396 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 ZBTB41Q5SVQ8 909 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 IRF2BP1Q8IU81 584 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 THNSL1Q8IYQ7 743 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 CCAR2Q8N163 923 aaKnown RBP18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 CEP120Q8N960 986 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 APBB2Q92870 758 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 BADQ92934 168 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 FBXL18Q96ME1 805 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 CEP63Q96MT8 703 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 TRAIPQ9BWF2 469 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 FTHL17Q9BXU8 183 aa18.41■□□□□ 0.54
EXOSC3-203ENST00000465229 SCN5AQ14524 2016 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 KIAA0391O15091 583 aaKnown RBP18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 EXTL3O43909 919 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 AKAP3O75969 853 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 SYN1P17600 705 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 ACOT2P49753 483 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 COPB1P53618 953 aaKnown RBP18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 SEZ6Q53EL9 994 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 CEP135Q66GS9 1140 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 CRELD2Q6UXH1 353 aaPredicted RBP18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 GPD1LQ8N335 351 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 RDH13Q8NBN7 331 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 LINC01599Q8WXQ3 324 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 FAM213AQ9BRX8 229 aa18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
EXOSC3-203ENST00000465229 KIF2AO00139 706 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 ENPP3O14638 875 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 TEX33O43247 280 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 LDHAP00338 332 aaKnown RBP18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 FAM43BQ6ZT52 329 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 APBB1IPQ7Z5R6 666 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 CBWD2Q8IUF1 395 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 FAM114A1Q8IWE2 563 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 TC2NQ8N9U0 490 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 RGS18Q9NS28 235 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 FAM105AQ9NUU6 356 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 PCDHB2Q9Y5E7 798 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 TANC1Q9C0D5 1861 aa18.39■□□□□ 0.53
EXOSC3-203ENST00000465229 A0A0U1RQF3 1178 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 ARHGAP6O43182 974 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 STX10O60499 249 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 FGFR1OPO95684 399 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 TUBB4AP04350 444 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 STAG3L1P0CL83 205 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 PSMC2P35998 433 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 TNFSF9P41273 254 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 OSTNP61366 133 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 SNRNP35Q16560 246 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 CNKSR3Q6P9H4 555 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 NYAP1Q6ZVC0 841 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 TMEM192Q8IY95 271 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 SMG8Q8ND04 991 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 PANX2Q96RD6 677 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 NXF3Q9H4D5 531 aaKnown RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 KIAA1586Q9HCI6 787 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 CPSF3Q9UKF6 684 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms