RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 BTG3Q14201 252 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 ZBTB41Q5SVQ8 909 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 HS2ST1Q7LGA3 356 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 CMTR2Q8IYT2 770 aaKnown RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 TRIML1Q8N9V2 468 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 RSPH1Q8WYR4 309 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 ACAP3Q96P50 834 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 GAD1Q99259 594 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 PCIF1Q9H4Z3 704 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 KLK14Q9P0G3 267 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 AGO2Q9UKV8 859 aaKnown RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 INPP5FQ9Y2H2 1132 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 GBF1Q92538 1859 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 LINC01553A4QN01 128 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CLIC2O15247 247 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 INPPL1O15357 1258 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CLTAP09496 248 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 YARSP54577 528 aaKnown RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 KYAT1Q16773 422 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 KLHL40Q2TBA0 621 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 NOMO2Q5JPE7 1267 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 LRRC43Q8N309 656 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 FIBCD1Q8N539 461 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 GSTCDQ8NEC7 633 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 ZSWIM2Q8NEG5 633 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 MIOSQ9NXC5 875 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 TMEM63CQ9P1W3 806 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
CPNE1-221ENST00000462352 TRAF3IP3Q9Y228 551 aa12.86□□□□□ -0.35
CPNE1-221ENST00000462352 LAMA2P24043 3122 aaKnown RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 FNDC1Q4ZHG4 1894 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 GOLGA8IPA6NC78 632 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 GOLGA8JA6NMD2 632 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 CALUO43852 315 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 POMCP01189 267 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 CXCL8P10145 99 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 ACOT2P49753 483 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 SCNN1GP51170 649 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 STIM1Q13586 685 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 CAVIN1Q6NZI2 390 aaKnown RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 CRELD2Q6UXH1 353 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 ALKAL1Q6UXT8 129 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 LRRC55Q6ZSA7 311 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 TIFAQ96CG3 184 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 SNX27Q96L92 541 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 RPS6KC1Q96S38 1066 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 SLC28A3Q9HAS3 691 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
CPNE1-221ENST00000462352 MRPL42Q9Y6G3 142 aaKnown RBP12.85□□□□□ -0.35
CPNE1-221ENST00000462352 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 PTGESO14684 152 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 PSMA7O14818 248 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 EXTL3O43909 919 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 PPP1R2P41236 205 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 CYP2J2P51589 502 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 TAP1Q03518 808 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 NFKBIBQ15653 356 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
CPNE1-221ENST00000462352 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 XKR4Q5GH76 650 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 SPRED2Q7Z698 418 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 XXYLT1Q8NBI6 393 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 NOC3LQ8WTT2 800 aaKnown RBP12.84□□□□□ -0.35
CPNE1-221ENST00000462352 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 CWH43Q9H720 699 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 RPF1Q9H9Y2 349 aaKnown RBP12.84□□□□□ -0.35
CPNE1-221ENST00000462352 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 KANSL3Q9P2N6 904 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
CPNE1-221ENST00000462352 SMIM28A0A1B0GU29 152 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms