RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
SSXP3-201ENST00000442971 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 LGMNQ99538 433 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 DNAJB4Q9UDY4 337 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 MED13Q9UHV7 2174 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 ABCB11O95342 1321 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 MYBPHLA2RUH7 354 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
SSXP3-201ENST00000442971 SPECC1L-ADORA2AF8WAN1 911 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 ARNTLO00327 626 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 ARHGAP33O14559 1287 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 CCL16O15467 120 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 XYLBO75191 536 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 GJB3O75712 270 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 LUC7L3O95232 432 aaKnown RBP8.33□□□□□ -1.08
SSXP3-201ENST00000442971 APBB3O95704 486 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 SERPINF2P08697 491 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 MYCLP12524 364 aaPredicted RBP8.33□□□□□ -1.08
SSXP3-201ENST00000442971 PDE6AP16499 860 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 DPP6P42658 865 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 DGKEP52429 567 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 VAC14Q08AM6 782 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 DUOXA1Q1HG43 343 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 PABPC1LQ4VXU2 614 aaKnown RBP8.33□□□□□ -1.08
SSXP3-201ENST00000442971 TTBK2Q6IQ55 1244 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 VITQ6UXI7 678 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 RALGPS2Q86X27 583 aaPredicted RBP8.33□□□□□ -1.08
SSXP3-201ENST00000442971 TSC1Q92574 1164 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 MOCOSQ96EN8 888 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 GAD1Q99259 594 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 MAF1Q9H063 256 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 PXMP2Q9NR77 195 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
SSXP3-201ENST00000442971 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 FPGT-TNNI3KV9GXZ4 949 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 DOCK5Q9H7D0 1870 aa8.33□□□□□ -1.08
SSXP3-201ENST00000442971 WDR19Q8NEZ3 1342 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 ATXN2Q99700 1313 aaKnown RBP8.32□□□□□ -1.08
SSXP3-201ENST00000442971 ZNF532Q9HCE3 1301 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 RRN3P2A6NIE6 340 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 GOLGA8CPA6NN73 597 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 NRG2O14511 850 aaPredicted RBP8.32□□□□□ -1.08
SSXP3-201ENST00000442971 MARK3P27448 753 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 CTHP32929 405 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 PTGER3P43115 390 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 GLUD2P49448 558 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 EXOSC9Q06265 439 aaKnown RBP8.32□□□□□ -1.08
SSXP3-201ENST00000442971 GRM4Q14833 912 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 PPM1LQ5SGD2 360 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 KIAA1614Q5VZ46 1190 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 METTL7BQ6UX53 244 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 BTNL9Q6UXG8 535 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 CYFIP1Q7L576 1253 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 TAS1R1Q7RTX1 841 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
SSXP3-201ENST00000442971 FAM228AQ86W67 206 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 GLYCTKQ8IVS8 523 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 ZNF444Q8N0Y2 327 aaPredicted RBP8.32□□□□□ -1.08
SSXP3-201ENST00000442971 CEP76Q8TAP6 659 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 LPIN3Q9BQK8 851 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 HERC2P3Q9BVR0 1158 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 GBP3Q9H0R5 595 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 SMC4Q9NTJ3 1288 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 HCFC1R1Q9NWW0 138 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 PILRBQ9UKJ0 227 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 TELO2Q9Y4R8 837 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 CABIN1Q9Y6J0 2220 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 HIVEP3Q5T1R4 2406 aa8.32□□□□□ -1.08
SSXP3-201ENST00000442971 ZSCAN20P17040 1043 aaPredicted RBP8.31□□□□□ -1.08
SSXP3-201ENST00000442971 HOXD12P35452 270 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 RTP5Q14D33 572 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 IGFBP7Q16270 282 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 USH1GQ495M9 461 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 FAM78AQ5JUQ0 283 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
SSXP3-201ENST00000442971 LPCAT2Q7L5N7 544 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 ERICH1Q86X53 443 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 SETD7Q8WTS6 366 aaKnown RBP8.31□□□□□ -1.08
SSXP3-201ENST00000442971 DEPDC1BQ8WUY9 529 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 HIC2Q96JB3 615 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 PRDM16Q9HAZ2 1276 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 GPRC5CQ9NQ84 441 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 TBC1D13Q9NVG8 400 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 ERAP1Q9NZ08 941 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 DNMT3BQ9UBC3 853 aaKnown RBP8.31□□□□□ -1.08
SSXP3-201ENST00000442971 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 FN1P02751 2386 aaKnown RBP8.31□□□□□ -1.08
SSXP3-201ENST00000442971 ZBED9Q6R2W3 1325 aa8.31□□□□□ -1.08
SSXP3-201ENST00000442971 HELZP42694 1942 aaKnown RBP8.3□□□□□ -1.08
SSXP3-201ENST00000442971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 SMIM35A0A1B0GVV1 85 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 TCRBV5S4A2TA0A5A2 114 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 SRGAP3O43295 1099 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 MBD4O95243 580 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 SYPP08247 313 aa8.3□□□□□ -1.08
SSXP3-201ENST00000442971 HSPD1P10809 573 aaKnown RBP8.3□□□□□ -1.08
SSXP3-201ENST00000442971 INSRRP14616 1297 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms