RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 HSPA9P38646 679 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 TNNI2P48788 182 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 RASSF2P50749 326 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PDE1AP54750 535 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 NAA20P61599 178 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PLOD1Q02809 727 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 SULT2A1Q06520 285 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PPIDQ08752 370 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 TRIM32Q13049 653 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 QPCTQ16769 361 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ANKDD1AQ495B1 522 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 LIN52Q52LA3 116 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CAVIN4Q5BKX8 364 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 SPOUT1Q5T280 376 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 C6orf163Q5TEZ5 329 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 METTL21CQ5VZV1 264 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 BRICD5Q6PL45 260 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 BLOC1S2Q6QNY1 142 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 GRAMD2AQ8IUY3 354 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GSDMBQ8TAX9 411 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ACMSDQ8TDX5 336 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GIPC2Q8TF65 315 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CCT6BQ92526 530 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 RAPGEF5Q92565 580 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 LRRC45Q96CN5 670 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 C8orf48Q96LL4 319 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 NUP85Q9BW27 656 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CCSER1Q9C0I3 900 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GLT8D2Q9H1C3 349 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.96□□□□□ -1.94
LIG4-203ENST00000442234 C12orf4Q9NQ89 552 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 SEPT11Q9NVA2 429 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 USP40Q9NVE5 1235 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.96□□□□□ -1.948e-10■■■■■ 70.3
LIG4-203ENST00000442234 KLHL14Q9P2G3 628 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TRIM33Q9UPN9 1127 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 EXOC7Q9UPT5 735 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 SPTBN5Q9NRC6 3674 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 KIF24Q5T7B8 1368 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ABCC12Q96J65 1359 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 USP9XQ93008 2570 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 FAM170AA1A519 330 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GOLGA8BA8MQT2 603 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 E7ENQ6 273 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 XPOTO43592 962 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 TRAPPC3O43617 180 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 SNX2O60749 519 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GMNNO75496 209 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TJP3O95049 919 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 BAG3O95817 575 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 KRT16P08779 473 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ENO2P09104 434 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 EPB41P11171 864 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 PPP1R2P41236 205 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 STAT2P52630 851 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 COPS2P61201 443 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 NOP14P78316 857 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 KCNC4Q03721 635 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GRAPQ13588 217 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 NDUFA5Q16718 116 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TWF2Q6IBS0 349 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 PPP1R2P3Q6NXS1 205 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 DHX32Q7L7V1 743 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 TMTC1Q8IUR5 882 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 MAPKAPK5Q8IW41 473 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ENAHQ8N8S7 591 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 GALNT6Q8NCL4 622 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GRAPLQ8TC17 118 aaPredicted RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 PIGOQ8TEQ8 1089 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GIPC3Q8TF64 312 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 STK32AQ8WU08 396 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ARNTL2Q8WYA1 636 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GLMNQ92990 594 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 MCUR1Q96AQ8 359 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CENPTQ96BT3 561 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 KCTD12Q96CX2 325 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 TCEANC2Q96MN5 208 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 UQCC2Q9BRT2 126 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TIPINQ9BVW5 301 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 FAM129AQ9BZQ8 928 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 SNX25Q9H3E2 840 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PARVGQ9HBI0 331 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ZC4H2Q9NQZ6 224 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 KRT82Q9NSB4 513 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TXLNGQ9NUQ3 528 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TBC1D23Q9NUY8 699 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 INTS9Q9NV88 658 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 ADAM22Q9P0K1 906 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 THEGQ9P2T0 379 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 GABBR1Q9UBS5 961 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 RALYQ9UKM9 306 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 NFU1Q9UMS0 254 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TELO2Q9Y4R8 837 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 COL6A6A6NMZ7 2263 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CLTCL1P53675 1640 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PXDNLA1KZ92 1463 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 PAPPAQ13219 1627 aa2.95□□□□□ -1.94
LIG4-203ENST00000442234 SRRM3A6NNA2 597 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms