RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ZFP42Q96MM3 310 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 MSTO1Q9BUK6 570 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 MRPL9Q9BYD2 267 aaKnown RBP24.38■■□□□ 1.49
PTPN18-205ENST00000428843 GBP3Q9H0R5 595 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 CLSTN2Q9H4D0 955 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 ZNF576Q9H609 170 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 MIOSQ9NXC5 875 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 CITO14578 2027 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 RALGAPA2Q2PPJ7 1873 aa24.38■■□□□ 1.49
PTPN18-205ENST00000428843 OGTO15294 1046 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 INPPL1O15357 1258 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 FAM189A1O60320 539 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 KNOP1Q1ED39 458 aaKnown RBP24.37■■□□□ 1.49
PTPN18-205ENST00000428843 GPR153Q6NV75 609 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 CLP1Q92989 425 aaKnown RBP24.37■■□□□ 1.49
PTPN18-205ENST00000428843 ACAP3Q96P50 834 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 TGS1Q96RS0 853 aaKnown RBP24.37■■□□□ 1.49
PTPN18-205ENST00000428843 TTYH1Q9H313 450 aaPredicted RBP24.37■■□□□ 1.49
PTPN18-205ENST00000428843 CWH43Q9H720 699 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 TBC1D13Q9NVG8 400 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 MAN1B1Q9UKM7 699 aa24.37■■□□□ 1.49
PTPN18-205ENST00000428843 AGO2Q9UKV8 859 aaKnown RBP24.37■■□□□ 1.49
PTPN18-205ENST00000428843 TGFB1I1O43294 461 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 POMCP01189 267 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 GARTP22102 1010 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 TNFSF9P41273 254 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 SCNN1GP51170 649 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 YARSP54577 528 aaKnown RBP24.36■■□□□ 1.49
PTPN18-205ENST00000428843 ERVK-21P61565 698 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 ZBTB41Q5SVQ8 909 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 SPOUT1Q5T280 376 aaKnown RBP24.36■■□□□ 1.49
PTPN18-205ENST00000428843 ZNF697Q5TEC3 545 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 GSTCDQ8NEC7 633 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 RPS6KC1Q96S38 1066 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 C17orf80Q9BSJ5 609 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 CXCL16Q9H2A7 254 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 CERS4Q9HA82 394 aa24.36■■□□□ 1.49
PTPN18-205ENST00000428843 CLTAP09496 248 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 RNASELQ05823 741 aaKnown RBP24.35■■□□□ 1.49
PTPN18-205ENST00000428843 KYAT1Q16773 422 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 ZNF658Q5TYW1 1059 aaPredicted RBP24.35■■□□□ 1.49
PTPN18-205ENST00000428843 ARMCX5Q6P1M9 558 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 SMYD4Q8IYR2 804 aaPredicted RBP24.35■■□□□ 1.49
PTPN18-205ENST00000428843 CBWD1Q9BRT8 395 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 AGPAT3Q9NRZ7 376 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 TOPORSQ9NS56 1045 aaPredicted RBP24.35■■□□□ 1.49
PTPN18-205ENST00000428843 KANSL3Q9P2N6 904 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 MTUS1Q9ULD2 1270 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 MAPK8IP1Q9UQF2 711 aa24.35■■□□□ 1.49
PTPN18-205ENST00000428843 MEFVO15553 781 aaPredicted RBP24.34■■□□□ 1.49
PTPN18-205ENST00000428843 ISM2Q6H9L7 571 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 ZNF280BQ86YH2 543 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 SNX27Q96L92 541 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 SAMD11Q96NU1 681 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 NUP62CLQ9H1M0 184 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 KCTD10Q9H3F6 313 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 SEMA6BQ9H3T3 888 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 PCIF1Q9H4Z3 704 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 NRDE2Q9H7Z3 1164 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 KIAA1468Q9P260 1216 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 PLAGL2Q9UPG8 496 aa24.34■■□□□ 1.49
PTPN18-205ENST00000428843 PTGESO14684 152 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 DDHD2O94830 711 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 KIF20AO95235 890 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 CXCL8P10145 99 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 CTNNB1P35222 781 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 BMPR1AP36894 532 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 ACOT2P49753 483 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 SNRPFP62306 86 aaKnown RBP24.33■■□□□ 1.49
PTPN18-205ENST00000428843 SLC10A6Q3KNW5 377 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 ALKAL1Q6UXT8 129 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 HS2ST1Q7LGA3 356 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 GUF1Q8N442 669 aaKnown RBP24.33■■□□□ 1.49
PTPN18-205ENST00000428843 COLGALT1Q8NBJ5 622 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 ZSWIM2Q8NEG5 633 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 ARNTL2Q8WYA1 636 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 SAAL1Q96ER3 474 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 FAM161BQ96MY7 647 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 CPSF3Q9UKF6 684 aaKnown RBP24.33■■□□□ 1.49
PTPN18-205ENST00000428843 RWDD3Q9Y3V2 267 aa24.33■■□□□ 1.49
PTPN18-205ENST00000428843 PDCD11Q14690 1871 aaKnown RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 BIN1O00499 593 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 CLIC2O15247 247 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 B4GALT3O60512 393 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 MBD3O95983 291 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 LAG3P18627 525 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 GRIK3Q13003 919 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 ENOX2Q16206 610 aaKnown RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 EPC2Q52LR7 807 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 XKR4Q5GH76 650 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 CRELD2Q6UXH1 353 aaPredicted RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 Q7L0L9 218 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 FAM193BQ96PV7 902 aaPredicted RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 FAM213AQ9BRX8 229 aa24.32■■□□□ 1.48
PTPN18-205ENST00000428843 GTPBP4Q9BZE4 634 aaKnown RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 RPF1Q9H9Y2 349 aaKnown RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 CGNQ9P2M7 1197 aaKnown RBP24.32■■□□□ 1.48
PTPN18-205ENST00000428843 GOLGA8IPA6NC78 632 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 EPOPA6NHQ4 379 aa24.31■■□□□ 1.48
PTPN18-205ENST00000428843 GOLGA8JA6NMD2 632 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms