RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PTPRJQ12913 1337 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 BIRC3Q13489 604 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 CFAP221Q4G0U5 840 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 SLFN12LQ6IEE8 588 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 PLPPR4Q7Z2D5 763 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 NOP9Q86U38 636 aaKnown RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 ARHGEF26Q96DR7 871 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 NLRP4Q96MN2 994 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 LRRC1Q9BTT6 524 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 INTUQ9ULD6 942 aa11.23□□□□□ -0.61
HDAC9-210ENST00000428307 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
HDAC9-210ENST00000428307 KRT5P13647 590 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 GTF2H1P32780 548 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 PSMD6Q15008 389 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 BEND6Q5SZJ8 279 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-210ENST00000428307 IER5Q5VY09 327 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 SPOPLQ6IQ16 392 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 PEX26Q7Z412 305 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 SHC3Q92529 594 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 TAF4BQ92750 862 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 PCDHB18PQ96TA0 734 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 FUT8Q9BYC5 575 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 SMARCAD1Q9H4L7 1026 aa11.22□□□□□ -0.61
HDAC9-210ENST00000428307 RBM12Q9NTZ6 932 aaKnown RBP11.22□□□□□ -0.61
HDAC9-210ENST00000428307 SUCLA2Q9P2R7 463 aaPredicted RBP11.22□□□□□ -0.61
HDAC9-210ENST00000428307 BUB1BO60566 1050 aaPredicted RBP11.21□□□□□ -0.61
HDAC9-210ENST00000428307 MSCO60682 206 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 ERLIN1O75477 346 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
HDAC9-210ENST00000428307 PIGRP01833 764 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 MMEP08473 750 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 TMEM253P0C7T8 217 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 CHRNB2P17787 502 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 TNFSF9P41273 254 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 CLCN3P51790 818 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 SLC7A5Q01650 507 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 TDRD10Q5VZ19 366 aaKnown RBP11.21□□□□□ -0.61
HDAC9-210ENST00000428307 EFCAB12Q6NXP0 572 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 DPP9Q86TI2 863 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 CDR2LQ86X02 465 aaPredicted RBP11.21□□□□□ -0.61
HDAC9-210ENST00000428307 KRT222Q8N1A0 295 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 LMBR1Q8WVP7 490 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 PTPN18Q99952 460 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 PLEKHA4Q9H4M7 779 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 NOCTQ9UK39 431 aaKnown RBP11.21□□□□□ -0.61
HDAC9-210ENST00000428307 CENPFP49454 3210 aa11.21□□□□□ -0.61
HDAC9-210ENST00000428307 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.62
HDAC9-210ENST00000428307 ANKRD62A6NC57 917 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 KIF4AO95239 1232 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 C4BPAP04003 597 aaKnown RBP11.21□□□□□ -0.62
HDAC9-210ENST00000428307 CYP11B1P15538 503 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 ARHGAP1Q07960 439 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 MXD4Q14582 209 aaPredicted RBP11.21□□□□□ -0.62
HDAC9-210ENST00000428307 ZACNQ401N2 412 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 WDR93Q6P2C0 686 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 C15orf39Q6ZRI6 1047 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 OR5B17Q8NGF7 314 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 HNRNPLLQ8WVV9 542 aaKnown RBP11.21□□□□□ -0.62
HDAC9-210ENST00000428307 TCP11Q8WWU5 503 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 RFFLQ8WZ73 363 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 GDAP1L1Q96MZ0 367 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 PPP1R16BQ96T49 567 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 ST7Q9NRC1 585 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 DMGDHQ9UI17 866 aaKnown RBP11.21□□□□□ -0.62
HDAC9-210ENST00000428307 COG5Q9UP83 839 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 WDR81Q562E7 1941 aa11.21□□□□□ -0.62
HDAC9-210ENST00000428307 IGKV6-21A0A0C4DH24 114 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 PIK3CAP42336 1068 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 PLA2G4AP47712 749 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 EFNA5P52803 228 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 CLDN10P78369 228 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 MAPK6Q16659 721 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 MMGT1Q8N4V1 131 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 GTF3C2Q8WUA4 911 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 MRPL4Q9BYD3 311 aaKnown RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 C1orf112Q9NSG2 853 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 FAM53CQ9NYF3 392 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 ERAP1Q9NZ08 941 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 DIS3Q9Y2L1 958 aaKnown RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 ADGRA2Q96PE1 1338 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 CEP104O60308 925 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms