RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 TBKBP1A7MCY6 615 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 CLIC2O15247 247 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
TMEM253-201ENST00000418511 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
TMEM253-201ENST00000418511 MLH1P40692 756 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 GRM5P41594 1212 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 PRCPP42785 496 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 SPRED2Q7Z698 418 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 PGBD4Q96DM1 585 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 ZFP42Q96MM3 310 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 CASD1Q96PB1 797 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 GAD1Q99259 594 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 RAD9AQ99638 391 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 RSAD1Q9HA92 442 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
TMEM253-201ENST00000418511 GOLGA8IPA6NC78 632 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 ARL5CA6NH57 179 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 GOLGA8JA6NMD2 632 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 OGTO15294 1046 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 OFD1O75665 1012 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 CA3P07451 260 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 ACOT2P49753 483 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 NFKBIBQ15653 356 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 CCDC183Q5T5S1 534 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 SLFN12LQ6IEE8 588 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
TMEM253-201ENST00000418511 ARMCX5Q6P1M9 558 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 GLB1LQ6UWU2 654 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 Q7L0L9 218 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
TMEM253-201ENST00000418511 HACE1Q8IYU2 909 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 GUF1Q8N442 669 aaKnown RBP13.4□□□□□ -0.26
TMEM253-201ENST00000418511 NOC3LQ8WTT2 800 aaKnown RBP13.4□□□□□ -0.26
TMEM253-201ENST00000418511 TMEM117Q9H0C3 514 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 NKX2-4Q9H2Z4 354 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 AGO2Q9UKV8 859 aaKnown RBP13.4□□□□□ -0.26
TMEM253-201ENST00000418511 INSL6Q9Y581 213 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
TMEM253-201ENST00000418511 CXCL8P10145 99 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 DNAJB2P25686 324 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 SCNN1GP51170 649 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 CYP2J2P51589 502 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 BTG3Q14201 252 aaPredicted RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 LRRC55Q6ZSA7 311 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 RBM43Q6ZSC3 357 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 HS2ST1Q7LGA3 356 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 GSTCDQ8NEC7 633 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 ACAP3Q96P50 834 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 TYW1Q9NV66 732 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 HSPBP1Q9NZL4 362 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 GIT1Q9Y2X7 761 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 MRPL42Q9Y6G3 142 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 TRANK1O15050 2925 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 REV3LO60673 3130 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 HOXA2O43364 376 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 B4GALT3O60512 393 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 POMCP01189 267 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 GARTP22102 1010 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 RAB30Q15771 203 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 ENOX2Q16206 610 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 GLRA4Q5JXX5 417 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 KLHL10Q6JEL2 608 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 CRELD2Q6UXH1 353 aaPredicted RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 CMTR2Q8IYT2 770 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 SNX27Q96L92 541 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 FAM213AQ9BRX8 229 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 MSRAQ9UJ68 235 aa13.39□□□□□ -0.27
TMEM253-201ENST00000418511 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
TMEM253-201ENST00000418511 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
TMEM253-201ENST00000418511 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 LINC01553A4QN01 128 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 PDXKO00764 312 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 PTGESO14684 152 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 KIF20AO95235 890 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 CLTAP09496 248 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 PTMSP20962 102 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 WNT7BP56706 349 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 SPAG1Q07617 926 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 SLC10A6Q3KNW5 377 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 ZCWPW2Q504Y3 356 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
TMEM253-201ENST00000418511 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms