RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CXCL16Q9H2A7 254 aa11.04□□□□□ -0.64
TMEM248-202ENST00000413593 TNMDQ9H2S6 317 aa11.04□□□□□ -0.64
TMEM248-202ENST00000413593 ST6GALNAC4Q9H4F1 302 aa11.04□□□□□ -0.64
TMEM248-202ENST00000413593 UBE2ZQ9H832 354 aaPredicted RBP11.04□□□□□ -0.64
TMEM248-202ENST00000413593 SEL1LQ9UBV2 794 aa11.04□□□□□ -0.64
TMEM248-202ENST00000413593 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
TMEM248-202ENST00000413593 PRG3Q9Y2Y8 225 aaPredicted RBP11.04□□□□□ -0.64
TMEM248-202ENST00000413593 NLRC5Q86WI3 1866 aa11.04□□□□□ -0.64
TMEM248-202ENST00000413593 KIAA1671Q9BY89 1806 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 HNRNPDLO14979 420 aaKnown RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 POLR2DO15514 142 aaKnown RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 CLDN3O15551 220 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 NCK2O43639 380 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 HARSP12081 509 aaKnown RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 IDEP14735 1019 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 ABCD1P33897 745 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.641e-7■■■■■ 30.9
TMEM248-202ENST00000413593 LIG4P49917 911 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 OSTNP61366 133 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 MCL1Q07820 350 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 TUSC3Q13454 348 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 NOLC1Q14978 699 aaKnown RBP eCLIP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 ZC2HC1CQ53FD0 456 aaPredicted RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 PLPP4Q5VZY2 271 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 ADALQ6DHV7 355 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 ZNF720Q7Z2F6 126 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 MAP4K3Q8IVH8 894 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 PABPC5Q96DU9 382 aaKnown RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 TCF25Q9BQ70 676 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 CCDC94Q9BW85 323 aaPredicted RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 STRA6Q9BX79 667 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 VN1R3Q9BXE9 311 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 TRIM9Q9C026 710 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 LRRC27Q9C0I9 530 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 MAGEF1Q9HAY2 307 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 NGRNQ9NPE2 291 aaKnown RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 ENTPD7Q9NQZ7 604 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 OLFML3Q9NRN5 406 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 ANKFY1Q9P2R3 1169 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 KCNH3Q9ULD8 1083 aa11.03□□□□□ -0.64
TMEM248-202ENST00000413593 FARP1Q9Y4F1 1045 aaPredicted RBP11.03□□□□□ -0.64
TMEM248-202ENST00000413593 MYH15Q9Y2K3 1946 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 HIDE1A8MVS5 230 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 F8W810 466 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 PPP1R37O75864 691 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 EFEMP2O95967 443 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 THP07101 528 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 CMA1P23946 247 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 OR1G1P47890 313 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 NRIP1P48552 1158 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 YARSP54577 528 aaKnown RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 AMPD3Q01432 767 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 NAB2Q15742 525 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 AAK1Q2M2I8 961 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 CTC1Q2NKJ3 1217 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 XKR4Q5GH76 650 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 HERC4Q5GLZ8 1057 aaPredicted RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 GLRA4Q5JXX5 417 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 CNNM4Q6P4Q7 775 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 SLC39A4Q6P5W5 647 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 RBM23Q86U06 439 aaKnown RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 VPS52Q8N1B4 723 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 HVCN1Q96D96 273 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 SNX27Q96L92 541 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 ACAP3Q96P50 834 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 ASB2Q96Q27 587 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 PYM1Q9BRP8 204 aaKnown RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 HAPLN2Q9GZV7 340 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 ZBP1Q9H171 429 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 IGFLR1Q9H665 355 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 TLE6Q9H808 572 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 MRPL44Q9H9J2 332 aaKnown RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 TOPORSQ9NS56 1045 aaPredicted RBP11.02□□□□□ -0.65
TMEM248-202ENST00000413593 PANK4Q9NVE7 773 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 CLDND1Q9NY35 253 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 TBC1D7Q9P0N9 293 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 EYSQ5T1H1 3165 aa11.02□□□□□ -0.65
TMEM248-202ENST00000413593 SMIM28A0A1B0GU29 152 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 A0A1B0GVL5 298 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 C2orf71A6NGG8 1288 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 CASTOR2A6NHX0 329 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 PER2O15055 1255 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 LINC01565O15544 149 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
TMEM248-202ENST00000413593 NR1I2O75469 434 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 CTSAP10619 480 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 PFKFB1P16118 471 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 KCNA5P22460 613 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 LTBRP36941 435 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 KCNQ1P51787 676 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 CASP5P51878 434 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 ASIC1P78348 528 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 COASYQ13057 564 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 ADAM15Q13444 863 aa11.01□□□□□ -0.65
TMEM248-202ENST00000413593 SMC1AQ14683 1233 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms