RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 A0A0B4J269 797 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 RFXAPO00287 272 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 B4GALT3O60512 393 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 POMCP01189 267 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 HOXD13P35453 343 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 SCNN1GP51170 649 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 STK4Q13043 487 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 EPC2Q52LR7 807 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 ZBTB41Q5SVQ8 909 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 NELFCDQ8IXH7 590 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 SYCP3Q8IZU3 236 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 COLGALT1Q8NBJ5 622 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 FBXO22Q8NEZ5 403 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 GDPD5Q8WTR4 605 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 SAMD11Q96NU1 681 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 RPS6KC1Q96S38 1066 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 CCDC94Q9BW85 323 aaPredicted RBP15.25■□□□□ 0.03
CPNE1-206ENST00000412056 GBP3Q9H0R5 595 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 PRDM12Q9H4Q4 367 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
CPNE1-206ENST00000412056 UBE4BO95155 1302 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 MEFVO15553 781 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-206ENST00000412056 FAM189A1O60320 539 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 RHOBTB3O94955 611 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 BMPR1AP36894 532 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 PBX3P40426 434 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 TNFSF9P41273 254 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 RNASELQ05823 741 aaKnown RBP15.24■□□□□ 0.03
CPNE1-206ENST00000412056 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 GSTCDQ8NEC7 633 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 ZNF507Q8TCN5 953 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 SCFD1Q8WVM8 642 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 RSPH1Q8WYR4 309 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 CCDC47Q96A33 483 aaKnown RBP15.24■□□□□ 0.03
CPNE1-206ENST00000412056 GUCD1Q96NT3 240 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 MSTO1Q9BUK6 570 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 NRDE2Q9H7Z3 1164 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 TMEM206Q9H813 350 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 RWDD3Q9Y3V2 267 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 STYXL1Q9Y6J8 313 aa15.24■□□□□ 0.03
CPNE1-206ENST00000412056 C5orf67F2Z3F1 127 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 PTGESO14684 152 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 OGTO15294 1046 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 ZC3H11AO75152 810 aaKnown RBP eCLIP15.23■□□□□ 0.03
CPNE1-206ENST00000412056 DDHD2O94830 711 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 LAG3P18627 525 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 ADSSP30520 456 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 PSMD2Q13200 908 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 KCNB1Q14721 858 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 BMT2Q1RMZ1 405 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 SLFN12LQ6IEE8 588 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 POMGNT1Q8WZA1 660 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 SNX27Q96L92 541 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 ACAP3Q96P50 834 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 DNAJB4Q9UDY4 337 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 PCDHA5Q9Y5H7 936 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 MYO7AQ13402 2215 aa15.23■□□□□ 0.03
CPNE1-206ENST00000412056 LPXNO60711 386 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 CXCL8P10145 99 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 SLC11A1P49279 550 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 YARSP54577 528 aaKnown RBP15.22■□□□□ 0.03
CPNE1-206ENST00000412056 BCAR1P56945 870 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 DSC1Q08554 894 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 GRIK3Q13003 919 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 GLRA4Q5JXX5 417 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 ARMCX5Q6P1M9 558 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 KCNT2Q6UVM3 1135 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 ELOA2Q8IYF1 753 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-206ENST00000412056 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 MYLIPQ8WY64 445 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 ZNF558Q96NG5 402 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 CDX2Q99626 313 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-206ENST00000412056 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 AAASQ9NRG9 546 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 TOPORSQ9NS56 1045 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-206ENST00000412056 CACNG4Q9UBN1 327 aa15.22■□□□□ 0.03
CPNE1-206ENST00000412056 HOOK1Q9UJC3 728 aaKnown RBP15.22■□□□□ 0.03
CPNE1-206ENST00000412056 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
CPNE1-206ENST00000412056 PRRC2BQ5JSZ5 2229 aaKnown RBP15.21■□□□□ 0.03
CPNE1-206ENST00000412056 LAMA3Q16787 3333 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 NT5C1B-RDH14C9J2C7 533 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 GOLGA6L22H0YM25 854 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 TGFB1I1O43294 461 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 SMC2O95347 1197 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 ITGB1P05556 798 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 RB1P06400 928 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 CLTAP09496 248 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 GARTP22102 1010 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 ACOT2P49753 483 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 GPM6BQ13491 265 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 ADGRE1Q14246 886 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 SLC10A6Q3KNW5 377 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 ALKAL1Q6UXT8 129 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 COLGALT2Q8IYK4 626 aa15.21■□□□□ 0.03
CPNE1-206ENST00000412056 SMYD4Q8IYR2 804 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-206ENST00000412056 KLHL23Q8NBE8 558 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms