RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 CCDC137Q6PK04 289 aaKnown RBP13.85□□□□□ -0.19
PTPRN-202ENST00000409251 EEPD1Q7L9B9 569 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 C4orf33Q8N1A6 199 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 GUF1Q8N442 669 aaKnown RBP13.85□□□□□ -0.19
PTPRN-202ENST00000409251 ATG4AQ8WYN0 398 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 PCDHGC5Q9Y5F6 944 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 ATXN2Q99700 1313 aaKnown RBP13.85□□□□□ -0.19
PTPRN-202ENST00000409251 MSH4O15457 936 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 POLR2MP0CAP2 368 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 ADCY2Q08462 1091 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 KCNA1Q09470 495 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 GRIK3Q13003 919 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 CCDC65Q8IXS2 484 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 IL31RAQ8NI17 732 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 HERC5Q9UII4 1024 aaKnown RBP13.85□□□□□ -0.19
PTPRN-202ENST00000409251 ZNF831Q5JPB2 1677 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 CCDC188H7C350 402 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 KIF3CO14782 793 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 PJA2O43164 708 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
PTPRN-202ENST00000409251 TNFRSF8P28908 595 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 RPL21P46778 160 aaKnown RBP13.85□□□□□ -0.19
PTPRN-202ENST00000409251 FAM182AQ5T1J6 154 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 CPNE8Q86YQ8 564 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 KRT35Q92764 455 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 C7orf25Q9BPX7 421 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
PTPRN-202ENST00000409251 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 C2CD6Q53TS8 623 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 CCHCR1Q8TD31 782 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 RAD54LQ92698 747 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 ZNF317Q96PQ6 595 aaPredicted RBP13.84□□□□□ -0.19
PTPRN-202ENST00000409251 ACP6Q9NPH0 428 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 SLC5A4Q9NY91 659 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 TAS2R14Q9NYV8 317 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 ASNSP08243 561 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 EIF3BP55884 814 aaKnown RBP13.84□□□□□ -0.19
PTPRN-202ENST00000409251 C6orf118Q5T5N4 469 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 GSTA5Q7RTV2 222 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 MCUR1Q96AQ8 359 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 ATG4CQ96DT6 458 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 GBP5Q96PP8 586 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 THAP2Q9H0W7 228 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 EBF2Q9HAK2 575 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 A0A0G2JND7 137 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 GOLGA8RI6L899 631 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 GAS7O60861 476 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 LACTB2Q53H82 288 aaPredicted RBP13.84□□□□□ -0.19
PTPRN-202ENST00000409251 ZNF662Q6ZS27 426 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 SCFD2Q8WU76 684 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 RUBCNQ92622 972 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 WDR11Q9BZH6 1224 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
PTPRN-202ENST00000409251 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.84□□□□□ -0.19
PTPRN-202ENST00000409251 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 PECAM1P16284 738 aaPredicted RBP13.83□□□□□ -0.19
PTPRN-202ENST00000409251 ADCY8P40145 1251 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 CASP5P51878 434 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 ASTE1Q2TB18 679 aaPredicted RBP13.83□□□□□ -0.19
PTPRN-202ENST00000409251 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 HIPK4Q8NE63 616 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 CHURC1Q8WUH1 139 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 MKL1Q969V6 931 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 KLF6Q99612 283 aaPredicted RBP13.83□□□□□ -0.19
PTPRN-202ENST00000409251 RPAP3Q9H6T3 665 aaPredicted RBP13.83□□□□□ -0.19
PTPRN-202ENST00000409251 RHBDL2Q9NX52 303 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 TTC7AQ9ULT0 858 aaPredicted RBP13.83□□□□□ -0.19
PTPRN-202ENST00000409251 MYH7BA7E2Y1 1941 aa13.83□□□□□ -0.19
PTPRN-202ENST00000409251 ANKRD63C9JTQ0 380 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 TXNDC9O14530 226 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 CFAP157Q5JU67 520 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 EXOC3L1Q86VI1 746 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 ARHGEF26Q96DR7 871 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 WDR18Q9BV38 432 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 ARL2BPQ9Y2Y0 163 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 CFAP69A5D8W1 941 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 GHRP10912 638 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 KLC1Q07866 573 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 CNGA2Q16280 664 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 SYCP3Q8IZU3 236 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 SYCE1Q8N0S2 351 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 ATXN2LQ8WWM7 1075 aaKnown RBP13.83□□□□□ -0.2
PTPRN-202ENST00000409251 DNAJC9Q8WXX5 260 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 ALG3Q92685 438 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 STMN2Q93045 179 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 LRRC37BQ96QE4 947 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 NUCKS1Q9H1E3 243 aaKnown RBP13.83□□□□□ -0.2
PTPRN-202ENST00000409251 AJAP1Q9UKB5 411 aaPredicted RBP13.83□□□□□ -0.2
PTPRN-202ENST00000409251 SLC12A4Q9UP95 1085 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 RIPK3Q9Y572 518 aa13.83□□□□□ -0.2
PTPRN-202ENST00000409251 ESYT2A0FGR8 921 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms