RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C19orf54Q5BKX5 351 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 PPP4R3AQ6IN85 833 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 OGFOD2Q6N063 350 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 FAM180AQ6UWF9 173 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 GADL1Q6ZQY3 521 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 USP30Q70CQ3 517 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 SRGAP1Q7Z6B7 1085 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 RALYLQ86SE5 291 aaKnown RBP4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 REXO1L1PQ8IX06 675 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 KLHL36Q8N4N3 616 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 DCBLD1Q8N8Z6 715 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 IFI44Q8TCB0 444 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC7A6OSQ96CW6 309 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 GPHA2Q96T91 129 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 PSMD1Q99460 953 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 C14orf93Q9H972 538 aaKnown RBP4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 BCO1Q9HAY6 547 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 ATP6V0A4Q9HBG4 840 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 LANCL2Q9NS86 450 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 PHTF1Q9UMS5 762 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 L1RE1Q9UN81 338 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 DAAM1Q9Y4D1 1078 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 PCDHA1Q9Y5I3 950 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 RFXAPO00287 272 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 B4GALT4O60513 344 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 GPR32O75388 356 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 LDHAP00338 332 aaKnown RBP4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 SBK3P0C264 359 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 KITP10721 976 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 MALP21145 153 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 PEX2P28328 305 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 ALDH1A3P47895 512 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 ADCY7P51828 1080 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 SESN2P58004 480 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 TLE1Q04724 770 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 HGFACQ04756 655 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 MTM1Q13496 603 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 SEMA5AQ13591 1074 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 ZNF385BQ569K4 471 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 MFSD14BQ5SR56 506 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 C10orf62Q5T681 223 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 DARS2Q6PI48 645 aaKnown RBP4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 APOA5Q6Q788 366 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 KBTBD2Q8IY47 623 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 C3orf20Q8ND61 904 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 OR5M3Q8NGP4 307 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 LRTOMTQ8WZ04 291 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC35A4Q96G79 324 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 PAWRQ96IZ0 340 aaKnown RBP4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 TBCBQ99426 244 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 C1orf43Q9BWL3 253 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 MANSC1Q9H8J5 431 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 RTEL1Q9NZ71 1219 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 TAGLN3Q9UI15 199 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 PCDHA6Q9UN73 950 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 CORO2BQ9UQ03 480 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 NR2E1Q9Y466 385 aa4.89□□□□□ -1.63
HMGB1P17-201ENST00000403495 ANO9A1A5B4 782 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 MATN2O00339 956 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 ARHGAP6O43182 974 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 SGTAO43765 313 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 SASH1O94885 1247 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 AHSGP02765 367 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 VSIG10L2P0DP72 767 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 RAP2AP10114 183 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 TYRP14679 529 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 GUCY1A2P33402 732 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 PHKA1P46020 1223 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLURP1P55000 103 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 FAM193AP78312 1265 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 NKX6-1P78426 367 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 ATP8B2P98198 1209 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 FLYWCH1Q4VC44 716 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 XRRA1Q6P2D8 792 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 MAEAQ7L5Y9 396 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 PPP1R3BQ86XI6 285 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 FAM43AQ8N2R8 423 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 VPS37AQ8NEZ2 397 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 CFHR4Q92496 578 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 CDK5RAP3Q96JB5 506 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 LCORQ96JN0 433 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 STRBPQ96SI9 672 aaKnown RBP4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 CDC5LQ99459 802 aaKnown RBP4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 PTPN18Q99952 460 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 DPYSL5Q9BPU6 564 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 ARPC5LQ9BPX5 153 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 C22orf23Q9BZE7 217 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLAMF7Q9NQ25 335 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 RIPOR2Q9Y4F9 1068 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 RNF114Q9Y508 228 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 USP19O94966 1318 aa4.88□□□□□ -1.63
HMGB1P17-201ENST00000403495 A0A088AWK7 358 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 UBE2QL1A1L167 161 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 MROH6A6NGR9 719 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 GOLIM4O00461 696 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 KPNA5O15131 536 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 NUAK1O60285 661 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 B4GALT3O60512 393 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 HRGP04196 525 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 RPLP2P05387 115 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms