RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 SV2BQ7L1I2 683 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 EHBP1Q8NDI1 1231 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 WNT8BQ93098 351 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 C11orf49Q9H6J7 331 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
SFTPA1-201ENST00000398636 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ARHGEF35A5YM69 484 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 KRT14P02533 472 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM153BP0C7A2 387 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 RFC5P40937 340 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 SOX10P56693 466 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ASIC1P78348 528 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ZBED6P86452 979 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 PPARDQ03181 441 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 GIT2Q14161 759 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM153CQ494X1 144 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 GBP6Q6ZN66 633 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 RUFY4Q6ZNE9 571 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ANKRD33Q7Z3H0 272 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM114A1Q8IWE2 563 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 CCDC170Q8IYT3 715 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 VTI1AQ96AJ9 217 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 KCND2Q9NZV8 630 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM153AQ9UHL3 310 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ZSCAN5CA6NGD5 496 aaPredicted RBP11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 MAGEB2O15479 319 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 B4GALT4O60513 344 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 EPB41P11171 864 aaKnown RBP11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ARL2P36404 184 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 PPP1R2P41236 205 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 VAV2P52735 878 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 GUCY1A3Q02108 690 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 KIF5AQ12840 1032 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 EMC2Q15006 297 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 MIIPQ5JXC2 388 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 KIAA0319LQ8IZA0 1049 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 MS4A14Q96JA4 679 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 ERGIC2Q96RQ1 377 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 SALL4Q9UJQ4 1053 aa11.29□□□□□ -0.6
SFTPA1-201ENST00000398636 SMIM35A0A1B0GVV1 85 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 EPHB6O15197 1021 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 IPO7O95373 1038 aaKnown RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 MTIF2P46199 727 aaKnown RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 CDK17Q00537 523 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 AMPD3Q01432 767 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 NNTQ13423 1086 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 FAM47CQ5HY64 1035 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 FIGNQ5HY92 759 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 EFCAB12Q6NXP0 572 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ZNF572Q7Z3I7 529 aaPredicted RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 RPAINQ86UA6 219 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 LRRC71Q8N4P6 559 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 DDX12PQ92771 950 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 PCMTD1Q96MG8 357 aaPredicted RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 REEP2Q9BRK0 252 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 NOC4LQ9BVI4 516 aaKnown RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 RBM12Q9NTZ6 932 aaKnown RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 STIM2Q9P246 746 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 KAT6AQ92794 2004 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 A0A1W2PQJ5 194 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ESYT3A0FGR9 886 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 RSPH10B2B2RC85 870 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 OPA1O60313 960 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 RSPH10BP0C881 870 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 GNAT1P11488 350 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ZNF131P52739 623 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 EHHADHQ08426 723 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 TRADDQ15628 312 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
SFTPA1-201ENST00000398636 ARHGAP20Q9P2F6 1191 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms