RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DNM3Q9UQ16 869 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 CLUHO75153 1309 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 A0A087WWV3 80 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 ACKR2O00590 384 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 GALR2O43603 387 aaPredicted RBP18.05■□□□□ 0.48
DDR1-229ENST00000396342 B4GALT3O60512 393 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 LILRB3O75022 631 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 XYLBO75191 536 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 MED24O75448 989 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 SPATA31C1P0DKV0 1188 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 CLCN5P51795 746 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 CDCA2Q69YH5 1023 aaPredicted RBP18.05■□□□□ 0.48
DDR1-229ENST00000396342 GLYCTKQ8IVS8 523 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 FBXO18Q8NFZ0 1043 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 TTPALQ9BTX7 342 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 RHOBTB2Q9BYZ6 727 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 FZD8Q9H461 694 aa18.05■□□□□ 0.48
DDR1-229ENST00000396342 WDR6Q9NNW5 1121 aaKnown RBP18.05■□□□□ 0.48
DDR1-229ENST00000396342 TOPORSQ9NS56 1045 aaPredicted RBP18.05■□□□□ 0.48
DDR1-229ENST00000396342 K7ERI5 159 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 LAD1O00515 517 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 VCPP55072 806 aaKnown RBP18.04■□□□□ 0.48
DDR1-229ENST00000396342 PDIA5Q14554 519 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 FAM171A1Q5VUB5 890 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 TAS1R1Q7RTX1 841 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 SNX29Q8TEQ0 813 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 RTP3Q9BQQ7 232 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
DDR1-229ENST00000396342 BHMT2Q9H2M3 363 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 KCNK12Q9HB15 430 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 CHST7Q9NS84 486 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 MIOSQ9NXC5 875 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 KIAA1024Q9UPX6 916 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 ATG2AQ2TAZ0 1938 aa18.04■□□□□ 0.48
DDR1-229ENST00000396342 CASTOR2A6NHX0 329 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 CCDC169A6NNP5 214 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 ST18O60284 1047 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 SPATA31D3P0C874 917 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 MYBP10242 640 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 FXR2P51116 673 aaKnown RBP eCLIP18.03■□□□□ 0.488e-8■■■□□ 16.6
DDR1-229ENST00000396342 DMP1Q13316 513 aaPredicted RBP18.03■□□□□ 0.48
DDR1-229ENST00000396342 SPATA31D4Q6ZUB0 917 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 DRC1Q96MC2 740 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 UROC1Q96N76 676 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 TCHPQ9BT92 498 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 SNTG2Q9NY99 539 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 GDAQ9Y2T3 454 aa18.03■□□□□ 0.48
DDR1-229ENST00000396342 ZFP37Q9Y6Q3 630 aaPredicted RBP18.03■□□□□ 0.48
DDR1-229ENST00000396342 TGM5O43548 720 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 RECQL4O94761 1208 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 HNRNPA1P09651 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDR1-229ENST00000396342 PPM1LQ5SGD2 360 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 ATF7IP2Q5U623 682 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 MCTP1Q6DN14 999 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 DTHD1Q6ZMT9 781 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 CDK5RAP3Q96JB5 506 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 GPR62Q9BZJ7 368 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 PRKD2Q9BZL6 878 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 NT5C3AQ9H0P0 336 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 SLC38A7Q9NVC3 462 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 POLIQ9UNA4 740 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 DUSP12Q9UNI6 340 aa18.02■□□□□ 0.48
DDR1-229ENST00000396342 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.48
DDR1-229ENST00000396342 H0Y858 1186 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 GFRA3O60609 400 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 PDGFBP01127 241 aaPredicted RBP18.01■□□□□ 0.47
DDR1-229ENST00000396342 SMTNP53814 917 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 TCF15Q12870 199 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 STRN3Q13033 797 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 PSMD5Q16401 504 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 GET4Q7L5D6 327 aaPredicted RBP18.01■□□□□ 0.47
DDR1-229ENST00000396342 SIX5Q8N196 739 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 HASPINQ8TF76 798 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 B3GALT6Q96L58 329 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
DDR1-229ENST00000396342 TECTAO75443 2155 aa18.01■□□□□ 0.47
DDR1-229ENST00000396342 H3BQV1 296 aa18■□□□□ 0.47
DDR1-229ENST00000396342 RFPL2O75678 378 aa18■□□□□ 0.47
DDR1-229ENST00000396342 ZMYND10O75800 440 aa18■□□□□ 0.47
DDR1-229ENST00000396342 B3GAT3O94766 335 aa18■□□□□ 0.47
DDR1-229ENST00000396342 FSHRP23945 695 aa18■□□□□ 0.47
DDR1-229ENST00000396342 ZRSR1Q15695 479 aaKnown RBP18■□□□□ 0.47
DDR1-229ENST00000396342 DCLRE1AQ6PJP8 1040 aa18■□□□□ 0.47
DDR1-229ENST00000396342 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
DDR1-229ENST00000396342 RNF168Q8IYW5 571 aaPredicted RBP18■□□□□ 0.47
DDR1-229ENST00000396342 PIK3R5Q8WYR1 880 aa18■□□□□ 0.47
DDR1-229ENST00000396342 RABGGTAQ92696 567 aa18■□□□□ 0.47
DDR1-229ENST00000396342 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
DDR1-229ENST00000396342 TIPINQ9BVW5 301 aa18■□□□□ 0.47
DDR1-229ENST00000396342 MRPL4Q9BYD3 311 aaKnown RBP18■□□□□ 0.47
DDR1-229ENST00000396342 C17orf75Q9HAS0 396 aa18■□□□□ 0.47
DDR1-229ENST00000396342 EPS15L1Q9UBC2 864 aa18■□□□□ 0.47
DDR1-229ENST00000396342 WNT16Q9UBV4 365 aa18■□□□□ 0.47
DDR1-229ENST00000396342 WNT7AO00755 349 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 RPL17P18621 184 aaKnown RBP17.99■□□□□ 0.47
DDR1-229ENST00000396342 ELF1P32519 619 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 PTGDRQ13258 359 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 ZNF568Q3ZCX4 644 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 PRSS55Q6UWB4 352 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms