RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 EGFRP00533 1210 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 COPB2P35606 906 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 ERFP50548 548 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 KCNJ2P63252 427 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 ELF3P78545 371 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-204ENST00000394601 PGM5Q15124 567 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 TTLL6Q8N841 843 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 AGBL3Q8NEM8 1001 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 AGAP11Q8TF27 550 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 EPB41L4BQ9H329 900 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 AMFRQ9UKV5 643 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 P4HA2O15460 535 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 DAPK3O43293 454 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 FGGP02679 453 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 YWHABP31946 246 aaKnown RBP16.68■□□□□ 0.26
PTBP1-204ENST00000394601 QARSP47897 775 aaKnown RBP16.68■□□□□ 0.26
PTBP1-204ENST00000394601 ZNF844Q08AG5 666 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 AADACL2Q6P093 401 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 LRIG3Q6UXM1 1119 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 SPATS2Q86XZ4 545 aaKnown RBP16.68■□□□□ 0.26
PTBP1-204ENST00000394601 ARFGAP2Q8N6H7 521 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 SEMA4DQ92854 862 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 CD101Q93033 1021 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 CARD9Q9H257 536 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 UBE2TQ9NPD8 197 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-204ENST00000394601 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
PTBP1-204ENST00000394601 SMIM24O75264 130 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 STBD1O95210 358 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 GCLMP48507 274 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 PTENP60484 403 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 IRX1P78414 480 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 LARGE2Q8N3Y3 721 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 OGFOD1Q8N543 542 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 ACP6Q9NPH0 428 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 ZDHHC18Q9NUE0 388 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 PCDHA3Q9Y5H8 950 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 SESN3P58005 492 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 SLC39A4Q6P5W5 647 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 TMC3Q7Z5M5 1100 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 C4orf19Q8IY42 314 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 FAM71AQ8IYT1 594 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 PFASO15067 1338 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 MARCKSL1P49006 195 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 PEX5P50542 639 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 MTMR1Q13613 665 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 ALCAMQ13740 583 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 WLSQ5T9L3 541 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 OTUD6AQ7L8S5 288 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 SYCP3Q8IZU3 236 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 EPS8L1Q8TE68 723 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 ACCSQ96QU6 501 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 KIAA1683Q9H0B3 1180 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 RAVER2Q9HCJ3 691 aaKnown RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 LARSQ9P2J5 1176 aaKnown RBP16.67■□□□□ 0.26
PTBP1-204ENST00000394601 TRIM33Q9UPN9 1127 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 TELO2Q9Y4R8 837 aa16.67■□□□□ 0.26
PTBP1-204ENST00000394601 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 ANKRD63C9JTQ0 380 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 CXCL9Q07325 125 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 NOP9Q86U38 636 aaKnown RBP16.66■□□□□ 0.26
PTBP1-204ENST00000394601 TMEM161BQ8NDZ6 487 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 KRT35Q92764 455 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 ACTR5Q9H9F9 607 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-204ENST00000394601 ZNRF3Q9ULT6 936 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 ALG6Q9Y672 507 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
PTBP1-204ENST00000394601 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 MTA2O94776 668 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 SGPL1O95470 568 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 DUPD1Q68J44 220 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 C11orf63Q6NUN7 778 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 ANO5Q75V66 913 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 CPNE8Q86YQ8 564 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 XXYLT1Q8NBI6 393 aa16.66■□□□□ 0.26
PTBP1-204ENST00000394601 CTNNBL1Q8WYA6 563 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-204ENST00000394601 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 TNFAIP3P21580 790 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 PCK1P35558 622 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 BSNDQ8WZ55 320 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 TRIM51Q9BSJ1 452 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 DIS3Q9Y2L1 958 aaKnown RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 PTGIRP43119 386 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 CBWD2Q8IUF1 395 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 CCDC197Q8NCU1 140 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 ATP6V0A4Q9HBG4 840 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 COQ4Q9Y3A0 265 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms