RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 XRCC4Q13426 336 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 UGCGQ16739 394 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 SEL1L2Q5TEA6 688 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 SUPT20HQ8NEM7 779 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 MORC4Q8TE76 937 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 SHC3Q92529 594 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 GMLQ99445 158 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 NUP85Q9BW27 656 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
USP5-202ENST00000389231 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 CCT8L1PA6NM43 557 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
USP5-202ENST00000389231 MTMR1Q13613 665 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 UBAP2Q5T6F2 1119 aaKnown RBP12.88□□□□□ -0.35
USP5-202ENST00000389231 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 ANKS4BQ8N8V4 417 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 ZNF564Q8TBZ8 553 aaPredicted RBP12.88□□□□□ -0.35
USP5-202ENST00000389231 PGM2Q96G03 612 aa12.88□□□□□ -0.35
USP5-202ENST00000389231 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
USP5-202ENST00000389231 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
USP5-202ENST00000389231 CCDC169A6NNP5 214 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 CYP1A2P05177 515 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 RARAP10276 462 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 GHRP10912 638 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 ALAS1P13196 640 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 MFAP3P55082 362 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 PPP1R7Q15435 360 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 SNRNP35Q16560 246 aaKnown RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 HIBCHQ6NVY1 386 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 CENPTQ96BT3 561 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 IWS1Q96ST2 819 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 SPOPO43791 374 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 CYP11B1P15538 503 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 COILP38432 576 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 KCNJ1P48048 391 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 MCCD1P59942 119 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 CYP1B1Q16678 543 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 FAM102BQ5T8I3 360 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 C4orf19Q8IY42 314 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 SYTL5Q8TDW5 730 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 PARD3BQ8TEW8 1205 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 SUFUQ9UMX1 484 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 PTPN22Q9Y2R2 807 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 ATP9AO75110 1047 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 GBP1P32455 592 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 IFI35P80217 286 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 SIX1Q15475 284 aaPredicted RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 KRT39Q6A163 491 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 MCF2L2Q86YR7 1114 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 UHMK1Q8TAS1 419 aaKnown RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 TAAR1Q96RJ0 339 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
USP5-202ENST00000389231 PARP2Q9UGN5 583 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 BAIAP2L1Q9UHR4 511 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 TBX20Q9UMR3 447 aa12.87□□□□□ -0.35
USP5-202ENST00000389231 RGS16O15492 202 aaPredicted RBP12.86□□□□□ -0.35
USP5-202ENST00000389231 EIF2AK2P19525 551 aaKnown RBP12.86□□□□□ -0.35
USP5-202ENST00000389231 CNGA1P29973 690 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 TAX1BP1Q86VP1 789 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 TMEM161BQ8NDZ6 487 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
USP5-202ENST00000389231 KIFC3Q9BVG8 833 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 ADAM7Q9H2U9 754 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 DONSONQ9NYP3 566 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 COQ4Q9Y3A0 265 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 ASNSP08243 561 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 SLC8A1P32418 973 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 MMP13P45452 471 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 ELF3P78545 371 aaPredicted RBP12.86□□□□□ -0.35
USP5-202ENST00000389231 CDR2Q01850 454 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 LLGL1Q15334 1064 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 LRRC34Q8IZ02 419 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 MAGEC3Q8TD91 643 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 ELAC2Q9BQ52 826 aaKnown RBP12.86□□□□□ -0.35
USP5-202ENST00000389231 TIPINQ9BVW5 301 aa12.86□□□□□ -0.35
USP5-202ENST00000389231 RAVER2Q9HCJ3 691 aaKnown RBP12.86□□□□□ -0.35
USP5-202ENST00000389231 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms