RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 GCP02774 474 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 SLC20A2Q08357 652 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 TBL3Q12788 808 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 FAM192AQ9GZU8 254 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ALAS1P13196 640 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ITIH2P19823 946 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 CDYLQ9Y232 598 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 FNDC3AQ9Y2H6 1198 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 NUP93Q8N1F7 819 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 TRIM45Q9H8W5 580 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ZSWIM5Q9P217 1185 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 DTNAQ9Y4J8 743 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 PDHBP11177 359 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 KIRREL3Q8IZU9 778 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 PARD3BQ8TEW8 1205 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ZNF483Q8TF39 744 aaPredicted RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 MANSC1Q9H8J5 431 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ZNF556Q9HAH1 456 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 BTBD7Q9P203 1132 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 H0YC42 278 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 AIM2O14862 343 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 RPS6P62753 249 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ICA1Q05084 483 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 LRRC24Q50LG9 513 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 HEATR6Q6AI08 1181 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 TNIP2Q8NFZ5 429 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 MPP4Q96JB8 637 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ISCUQ9H1K1 167 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
SRGAP3-202ENST00000383836 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 YEATS2Q9ULM3 1422 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 OSBPP22059 807 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 COPAP53621 1224 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 APOL6Q9BWW8 343 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 FUT8Q9BYC5 575 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 FAM129AQ9BZQ8 928 aa13.08□□□□□ -0.31
SRGAP3-202ENST00000383836 SORBS3O60504 671 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ALBP02768 609 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 MARCOQ9UEW3 520 aaPredicted RBP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 A1BGP04217 495 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ADORA1P30542 326 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 P3H1Q32P28 736 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 PASD1Q8IV76 773 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 NGRNQ9NPE2 291 aaKnown RBP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 GNPATO15228 680 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ASNA1O43681 348 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 MICU2Q8IYU8 434 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF786Q8N393 782 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 RNPEPQ9H4A4 650 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ATAD3AQ9NVI7 634 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ATP8B3O60423 1300 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 C7orf31Q8N865 590 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 CNDP1Q96KN2 507 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 SLC9A2Q9UBY0 812 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM49P0CI25 452 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM49CP0CI26 452 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 OR2W6PQ8NHA6 318 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 ULK4Q96C45 1275 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 EPS8L2Q9H6S3 715 aa13.08□□□□□ -0.32
SRGAP3-202ENST00000383836 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SLC9A1P19634 815 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 CASP1P29466 404 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 DRAP1Q14919 205 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 WDR93Q6P2C0 686 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM69Q86WT6 500 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 KPNA4O00629 521 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 NOP9Q86U38 636 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 FOXP3Q9BZS1 431 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 CAND2O75155 1236 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SLC1A1P43005 524 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 TCIRG1Q13488 830 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 NR1I3Q14994 352 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SLFN13Q68D06 897 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SLFN12LQ6IEE8 588 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 LVRNQ6Q4G3 990 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SCARA5Q6ZMJ2 495 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 CDY2AQ9Y6F7 541 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms