RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 IQCGQ9H095 443 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 RBM12Q9NTZ6 932 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 OGFRQ9NZT2 677 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 DMGDHQ9UI17 866 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 SGPL1O95470 568 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 HNRNPH3P31942 346 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 MAGEA8P43361 318 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 MARSP56192 900 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 GABPB1Q06547 395 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 LLGL2Q6P1M3 1020 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 INTS8Q75QN2 995 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 PEX26Q7Z412 305 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 ERO1BQ86YB8 467 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 THNSL1Q8IYQ7 743 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 RIN2Q8WYP3 895 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 THAP2Q9H0W7 228 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 RETREG1Q9H6L5 497 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 CTTNBP2NLQ9P2B4 639 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 SSU72P8A0A1W2PR75 194 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 INO80B-WBP1J3KQ70 363 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 MYBL2P10244 700 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 PEX19P40855 299 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 NLRP11P59045 1033 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 NAIF1Q69YI7 327 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 ABHD15Q6UXT9 468 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 VPS37AQ8NEZ2 397 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 KRT12Q99456 494 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 MMP19Q99542 508 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 INO80BQ9C086 356 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 AIPL1Q9NZN9 384 aa11.63□□□□□ -0.55
NEDD9-201ENST00000379433 DBR1Q9UK59 544 aaKnown RBP11.63□□□□□ -0.55
NEDD9-201ENST00000379433 TIMM44O43615 452 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 DGAT1O75907 488 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 TXNP10599 105 aaKnown RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CLCN3P51790 818 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 WNT7BP56706 349 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 TRADDQ15628 312 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 DAB2IPQ5VWQ8 1189 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 RNF149Q8NC42 400 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 LNX1Q8TBB1 728 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CTNNBL1Q8WYA6 563 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CENPOQ9BU64 300 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 UTP6Q9NYH9 597 aaKnown RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CWC15Q9P013 229 aaKnown RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 RBPJLQ9UBG7 517 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 IGSF9BQ9UPX0 1349 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 GRID2IPA4D2P6 1211 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 SPATA31C2B4DYI2 1134 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 TBC1D8O95759 1140 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CD58P19256 250 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 GUCY2FP51841 1108 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 RPS6KA1Q15418 735 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 AADACL2Q6P093 401 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 SLC39A4Q6P5W5 647 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 SCARA5Q6ZMJ2 495 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 NIPA1Q7RTP0 329 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CPNE8Q86YQ8 564 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 SPATA4Q8NEY3 305 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 GOLGA5Q8TBA6 731 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 ZC3H15Q8WU90 426 aaKnown RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 PRPF31Q8WWY3 499 aaKnown RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 ARHGEF26Q96DR7 871 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CDHR1Q96JP9 859 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 MKS1Q9NXB0 559 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 EXOC7Q9UPT5 735 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 LRRIQ3A6PVS8 624 aaPredicted RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 PPP1R37O75864 691 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 CDK17Q00537 523 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 MESDQ14696 234 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 XKR3Q5GH77 459 aa11.62□□□□□ -0.55
NEDD9-201ENST00000379433 MRRFQ96E11 262 aaKnown RBP11.62□□□□□ -0.55
NEDD9-201ENST00000379433 COL11A1P12107 1806 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-201ENST00000379433 KIAA1217Q5T5P2 1943 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 FTLP02792 175 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-201ENST00000379433 FDX1P10109 184 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 GTF2BQ00403 316 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 NAB2Q15742 525 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 PAPD7Q5XG87 772 aaKnown RBP11.61□□□□□ -0.55
NEDD9-201ENST00000379433 SV2AQ7L0J3 742 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 SLC35G2Q8TBE7 412 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 MSTO1Q9BUK6 570 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 STK33Q9BYT3 514 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 ERLIN1O75477 346 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 MMEP08473 750 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 ZNF286BP0CG31 522 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.552e-7■□□□□ 10.4
NEDD9-201ENST00000379433 CCDC92Q53HC0 331 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-201ENST00000379433 SREK1Q8WXA9 508 aaKnown RBP11.61□□□□□ -0.55
NEDD9-201ENST00000379433 KIFAP3Q92845 792 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 IQCDQ96DY2 449 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 C12orf42Q96LP6 360 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 ANKEF1Q9NU02 776 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 DMAC2Q9NW81 257 aa11.61□□□□□ -0.55
NEDD9-201ENST00000379433 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms