RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 LRRC43Q8N309 656 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 URGCPQ8TCY9 931 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 SAMD11Q96NU1 681 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 ACAP3Q96P50 834 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 GBP3Q9H0R5 595 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 TBC1D13Q9NVG8 400 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 KLK14Q9P0G3 267 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 INPP5FQ9Y2H2 1132 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 GDAQ9Y2T3 454 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 RWDD3Q9Y3V2 267 aa20.47■□□□□ 0.87
SSU72-203ENST00000378725 GBF1Q92538 1859 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 CLTAP09496 248 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 HARSP12081 509 aaKnown RBP20.46■□□□□ 0.87
SSU72-203ENST00000378725 BMPR1AP36894 532 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 SPRED2Q7Z698 418 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 NELFCDQ8IXH7 590 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 GPT2Q8TD30 523 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 POMGNT1Q8WZA1 660 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 ZFP42Q96MM3 310 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 C17orf80Q9BSJ5 609 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 MSTO1Q9BUK6 570 aa20.46■□□□□ 0.87
SSU72-203ENST00000378725 GTPBP4Q9BZE4 634 aaKnown RBP20.46■□□□□ 0.87
SSU72-203ENST00000378725 AGO2Q9UKV8 859 aaKnown RBP20.46■□□□□ 0.87
SSU72-203ENST00000378725 C5orf67F2Z3F1 127 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 MEFVO15553 781 aaPredicted RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 ADRB2P07550 413 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 MCM4P33991 863 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 YARSP54577 528 aaKnown RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 OSTNP61366 133 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 POU5F1Q01860 360 aaKnown RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 EPC2Q52LR7 807 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 SEZ6Q53EL9 994 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 COBLL1Q53SF7 1204 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 ZNF658Q5TYW1 1059 aaPredicted RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 CXCL16Q9H2A7 254 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 KCTD10Q9H3F6 313 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 CLSTN2Q9H4D0 955 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 NRDE2Q9H7Z3 1164 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 PLEKHA5Q9HAU0 1116 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 TOPORSQ9NS56 1045 aaPredicted RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 CGNQ9P2M7 1197 aaKnown RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 HCSTQ9UBK5 93 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 CPSF3Q9UKF6 684 aaKnown RBP20.45■□□□□ 0.86
SSU72-203ENST00000378725 LAMA3Q16787 3333 aa20.45■□□□□ 0.86
SSU72-203ENST00000378725 FNDC1Q4ZHG4 1894 aaPredicted RBP20.44■□□□□ 0.86
SSU72-203ENST00000378725 PTGESO14684 152 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 KIAA0391O15091 583 aaKnown RBP20.44■□□□□ 0.86
SSU72-203ENST00000378725 DDHD2O94830 711 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 KIF20AO95235 890 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 POMCP01189 267 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 RB1P06400 928 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 TNFSF9P41273 254 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 SCNN1GP51170 649 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 CAMK4Q16566 473 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 ZBTB41Q5SVQ8 909 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 CRELD2Q6UXH1 353 aaPredicted RBP20.44■□□□□ 0.86
SSU72-203ENST00000378725 ZNF280BQ86YH2 543 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 GUF1Q8N442 669 aaKnown RBP20.44■□□□□ 0.86
SSU72-203ENST00000378725 TMEM174Q8WUU8 243 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 CBWD1Q9BRT8 395 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 PLVAPQ9BX97 442 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 AAASQ9NRG9 546 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 AGPAT3Q9NRZ7 376 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 KIAA1468Q9P260 1216 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 MAN1B1Q9UKM7 699 aa20.44■□□□□ 0.86
SSU72-203ENST00000378725 LDHAP00338 332 aaKnown RBP20.43■□□□□ 0.86
SSU72-203ENST00000378725 LAG3P18627 525 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 DSC1Q08554 894 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 GRIK3Q13003 919 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 GRIN2CQ14957 1233 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 ARMCX5Q6P1M9 558 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 C12orf56Q8IXR9 622 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 COLGALT1Q8NBJ5 622 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 SNX27Q96L92 541 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 RPS6KC1Q96S38 1066 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 CERS4Q9HA82 394 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 CNTN3Q9P232 1028 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 PLAGL2Q9UPG8 496 aa20.43■□□□□ 0.86
SSU72-203ENST00000378725 SMIM28A0A1B0GU29 152 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 TTC26A0AVF1 554 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 PDXKO00764 312 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 B4GALT3O60512 393 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 THP07101 528 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 KCNE1P15382 129 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 ACOT2P49753 483 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 RNASELQ05823 741 aaKnown RBP20.42■□□□□ 0.86
SSU72-203ENST00000378725 MORC3Q14149 939 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 NAB2Q15742 525 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 ENOX2Q16206 610 aaKnown RBP20.42■□□□□ 0.86
SSU72-203ENST00000378725 SPOUT1Q5T280 376 aaKnown RBP20.42■□□□□ 0.86
SSU72-203ENST00000378725 HS2ST1Q7LGA3 356 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 COLGALT2Q8IYK4 626 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 GOLGA5Q8TBA6 731 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 ARNTL2Q8WYA1 636 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 P2RX5Q93086 422 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 TMEM175Q9BSA9 504 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 PCIF1Q9H4Z3 704 aa20.42■□□□□ 0.86
SSU72-203ENST00000378725 RPF1Q9H9Y2 349 aaKnown RBP20.42■□□□□ 0.86
SSU72-203ENST00000378725 PCDHB12Q9Y5F1 795 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms