RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.21
HSPG2-201ENST00000374673 AGPAT3Q9NRZ7 376 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 PARP2Q9UGN5 583 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 AGO2Q9UKV8 859 aaKnown RBP16.39■□□□□ 0.21
HSPG2-201ENST00000374673 YBX2Q9Y2T7 364 aaKnown RBP16.39■□□□□ 0.21
HSPG2-201ENST00000374673 LCHNA4D1U4 455 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 BIN1O00499 593 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 LDHAP00338 332 aaKnown RBP16.38■□□□□ 0.21
HSPG2-201ENST00000374673 CLTAP09496 248 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 MYOGP15173 224 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 DNAJB2P25686 324 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 MLH1P40692 756 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
HSPG2-201ENST00000374673 OSTNP61366 133 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 POU5F1Q01860 360 aaKnown RBP16.38■□□□□ 0.21
HSPG2-201ENST00000374673 BTG3Q14201 252 aaPredicted RBP16.38■□□□□ 0.21
HSPG2-201ENST00000374673 KLHL40Q2TBA0 621 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 CCDC183Q5T5S1 534 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 ISM2Q6H9L7 571 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 TMEM192Q8IY95 271 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 ADSSL1Q8N142 457 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 LRRC43Q8N309 656 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 TMEM174Q8WUU8 243 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 GAD1Q99259 594 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
HSPG2-201ENST00000374673 CPSF3Q9UKF6 684 aaKnown RBP16.38■□□□□ 0.21
HSPG2-201ENST00000374673 MAPK8IP1Q9UQF2 711 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
HSPG2-201ENST00000374673 ARL5CA6NH57 179 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 CA3P07451 260 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 TNFSF9P41273 254 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 STIM1Q13586 685 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 NFIL3Q16649 462 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 PAN2Q504Q3 1202 aaKnown RBP16.37■□□□□ 0.21
HSPG2-201ENST00000374673 SEZ6Q53EL9 994 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 XKR4Q5GH76 650 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 NOMO2Q5JPE7 1267 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 HABP4Q5JVS0 413 aaKnown RBP16.37■□□□□ 0.21
HSPG2-201ENST00000374673 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 FIBCD1Q8N539 461 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 GSTCDQ8NEC7 633 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 URGCPQ8TCY9 931 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 SNX27Q96L92 541 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 HSPBP1Q9NZL4 362 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 KANSL3Q9P2N6 904 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 INPP5FQ9Y2H2 1132 aa16.37■□□□□ 0.21
HSPG2-201ENST00000374673 LINC01553A4QN01 128 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 SOX1O00570 391 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 CLIC2O15247 247 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 CALUO43852 315 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 EXTL3O43909 919 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 ADRB2P07550 413 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 AFF1P51825 1210 aaKnown RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 MYBPC2Q14324 1141 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 SLC10A6Q3KNW5 377 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 ZCWPW2Q504Y3 356 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 CENPPQ6IPU0 288 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 CRELD2Q6UXH1 353 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 ALKAL1Q6UXT8 129 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 LRRC55Q6ZSA7 311 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 SLC9A9Q8IVB4 645 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 GPD1LQ8N335 351 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 SYAP1Q96A49 352 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 TIFAQ96CG3 184 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 FBXL18Q96ME1 805 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 NKX2-4Q9H2Z4 354 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 SEMA6BQ9H3T3 888 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 PCIF1Q9H4Z3 704 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 RPF1Q9H9Y2 349 aaKnown RBP16.36■□□□□ 0.21
HSPG2-201ENST00000374673 PLEKHA5Q9HAU0 1116 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 TBC1D13Q9NVG8 400 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 MIOSQ9NXC5 875 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 KLK14Q9P0G3 267 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 CNTN3Q9P232 1028 aa16.36■□□□□ 0.21
HSPG2-201ENST00000374673 TMEM265A0A087WTH1 108 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 TTC26A0AVF1 554 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 PPP1R3GB7ZBB8 358 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 PTGESO14684 152 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 PSMA7O14818 248 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 CXCL8P10145 99 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
HSPG2-201ENST00000374673 ACOT2P49753 483 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 SCNN1GP51170 649 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 GRIK3Q13003 919 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
HSPG2-201ENST00000374673 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
HSPG2-201ENST00000374673 CD302Q8IX05 232 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 ZSWIM2Q8NEG5 633 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 CLP1Q92989 425 aaKnown RBP16.35■□□□□ 0.21
HSPG2-201ENST00000374673 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 DHTKD1Q96HY7 919 aaPredicted RBP16.35■□□□□ 0.21
HSPG2-201ENST00000374673 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 CWH43Q9H720 699 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms