RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
PFDN6-202ENST00000374607 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
PFDN6-202ENST00000374607 ZNF689Q96CS4 500 aaPredicted RBP16.62■□□□□ 0.25
PFDN6-202ENST00000374607 CASD1Q96PB1 797 aa16.62■□□□□ 0.25
PFDN6-202ENST00000374607 PCIF1Q9H4Z3 704 aa16.62■□□□□ 0.25
PFDN6-202ENST00000374607 RPF1Q9H9Y2 349 aaKnown RBP16.62■□□□□ 0.25
PFDN6-202ENST00000374607 MTUS1Q9ULD2 1270 aa16.62■□□□□ 0.25
PFDN6-202ENST00000374607 RWDD3Q9Y3V2 267 aa16.62■□□□□ 0.25
PFDN6-202ENST00000374607 PTPRSQ13332 1948 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 A0A0B4J269 797 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 TISP43B9A030 160 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 CLTAP09496 248 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 GARTP22102 1010 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
PFDN6-202ENST00000374607 SNRPFP62306 86 aaKnown RBP16.61■□□□□ 0.25
PFDN6-202ENST00000374607 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 CRIPAKQ8N1N5 446 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 CEP120Q8N960 986 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 SYAP1Q96A49 352 aaPredicted RBP16.61■□□□□ 0.25
PFDN6-202ENST00000374607 TGS1Q96RS0 853 aaKnown RBP16.61■□□□□ 0.25
PFDN6-202ENST00000374607 TYW1Q9NV66 732 aaKnown RBP16.61■□□□□ 0.25
PFDN6-202ENST00000374607 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 CGNQ9P2M7 1197 aaKnown RBP16.61■□□□□ 0.25
PFDN6-202ENST00000374607 MAN1B1Q9UKM7 699 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 PCDHB12Q9Y5F1 795 aa16.61■□□□□ 0.25
PFDN6-202ENST00000374607 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 LINC01553A4QN01 128 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
PFDN6-202ENST00000374607 CLIC2O15247 247 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 THP07101 528 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 CTNNB1P35222 781 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 PPP1R2P41236 205 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 ALDH7A1P49419 539 aaKnown RBP16.6■□□□□ 0.25
PFDN6-202ENST00000374607 ACOT2P49753 483 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 SCNN1GP51170 649 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 CYP2J2P51589 502 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 PPP2R3AQ06190 1150 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 BMT2Q1RMZ1 405 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 SLC39A4Q6P5W5 647 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
PFDN6-202ENST00000374607 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 ZFP42Q96MM3 310 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 TSG101Q99816 390 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 FAM213AQ9BRX8 229 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 IKZF4Q9H2S9 585 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 ZNF576Q9H609 170 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 RNF19AQ9NV58 838 aa16.6■□□□□ 0.25
PFDN6-202ENST00000374607 MRPL42Q9Y6G3 142 aaKnown RBP16.6■□□□□ 0.25
PFDN6-202ENST00000374607 ZC3H11AO75152 810 aaKnown RBP eCLIP16.59■□□□□ 0.252e-7■■■□□ 16.9
PFDN6-202ENST00000374607 LAG3P18627 525 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 TAP1Q03518 808 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 GRIK3Q13003 919 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 GPD1LQ8N335 351 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 GUF1Q8N442 669 aaKnown RBP16.59■□□□□ 0.25
PFDN6-202ENST00000374607 TRIML1Q8N9V2 468 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 SPATA20Q8TB22 786 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
PFDN6-202ENST00000374607 ARNTL2Q8WYA1 636 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 TBC1D13Q9NVG8 400 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 STYXL1Q9Y6J8 313 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 GBF1Q92538 1859 aa16.59■□□□□ 0.25
PFDN6-202ENST00000374607 TMEM265A0A087WTH1 108 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 CARNS1A5YM72 827 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 PDXKO00764 312 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 ABLIM1O14639 778 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 PSMA7O14818 248 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 EXTL3O43909 919 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 EXOC3O60645 756 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 CXCL8P10145 99 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 ADSSP30520 456 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 HOXD13P35453 343 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 TNFSF9P41273 254 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 PRCPP42785 496 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 CCDC183Q5T5S1 534 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 KLHL10Q6JEL2 608 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 TMEM192Q8IY95 271 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 RDH13Q8NBN7 331 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 FAM161BQ96MY7 647 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 ZNF558Q96NG5 402 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 PLEKHA5Q9HAU0 1116 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 RC3H2Q9HBD1 1191 aaKnown RBP16.58■□□□□ 0.24
PFDN6-202ENST00000374607 KIAA1586Q9HCI6 787 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 SLC38A7Q9NVC3 462 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 HSPBP1Q9NZL4 362 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 ZMYM2Q9UBW7 1377 aa16.58■□□□□ 0.24
PFDN6-202ENST00000374607 ZNF233A6NK53 670 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 TGFB1I1O43294 461 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 XPOTO43592 962 aaKnown RBP16.57■□□□□ 0.24
PFDN6-202ENST00000374607 ALDH2P05091 517 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 RPL13P26373 211 aaKnown RBP16.57■□□□□ 0.24
PFDN6-202ENST00000374607 OR1G1P47890 313 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 GLRA4Q5JXX5 417 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 CD302Q8IX05 232 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms