RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 MYCLP12524 364 aaPredicted RBP18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 ITGB5P18084 799 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 EIF2AK2P19525 551 aaKnown RBP18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 COPS2P61201 443 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 PRPF4BQ13523 1007 aaKnown RBP18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 TMEM154Q6P9G4 183 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 ANKRD23Q86SG2 305 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 SDCCAG8Q86SQ7 713 aaPredicted RBP18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 RNF10Q8N5U6 811 aaKnown RBP18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 METTL13Q8N6R0 699 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 MGARPQ8TDB4 240 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 SIX2Q9NPC8 291 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 NAGPAQ9UK23 515 aa18.54■□□□□ 0.56
LDLRAP1-201ENST00000374338 SP100P23497 879 aaPredicted RBP18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 BNIP1Q12981 228 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 PBKQ96KB5 322 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 FAM20AQ96MK3 541 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 RAB17Q9H0T7 212 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 BLOC1S6Q9UL45 172 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 F8VZ95 297 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 IPO5O00410 1097 aaKnown RBP18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 HIP1RO75146 1068 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 PSMD10O75832 226 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 GNA14O95837 355 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 SCNN1BP51168 640 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 CEP55Q53EZ4 464 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 AADACL2Q6P093 401 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 C1orf186Q6ZWK4 172 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 TYW1Q9NV66 732 aaKnown RBP18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 TMEM59LQ9UK28 342 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 TRAF3IP3Q9Y228 551 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 DDX3XO00571 662 aaKnown RBP eCLIP18.53■□□□□ 0.569e-8■■□□□ 14
LDLRAP1-201ENST00000374338 ATP6V1C1P21283 382 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 KAT5Q92993 513 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 PARVGQ9HBI0 331 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
LDLRAP1-201ENST00000374338 PITPNM2Q9BZ72 1349 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 IGSF9BQ9UPX0 1349 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 FOSP01100 380 aaPredicted RBP18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 RFC5P40937 340 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 ZNF211Q13398 564 aaPredicted RBP18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 EDRF1Q3B7T1 1238 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 SLC17A8Q8NDX2 589 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 WNK4Q96J92 1243 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 ADAM7Q9H2U9 754 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 PNMA3Q9UL41 463 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 TMX2Q9Y320 296 aa18.52■□□□□ 0.56
LDLRAP1-201ENST00000374338 TMEM110-MUSTN1A8MSY1 372 aa18.52■□□□□ 0.55
LDLRAP1-201ENST00000374338 PDXKO00764 312 aa18.52■□□□□ 0.55
LDLRAP1-201ENST00000374338 EXOC3O60645 756 aa18.52■□□□□ 0.55
LDLRAP1-201ENST00000374338 AIPL1Q9NZN9 384 aa18.52■□□□□ 0.55
LDLRAP1-201ENST00000374338 SNX3O60493 162 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 PEX10O60683 326 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 TPP2P29144 1249 aaPredicted RBP18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 PLA2G4FQ68DD2 849 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 ASRGL1Q7L266 308 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 DAAM2Q86T65 1068 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 KIFAP3Q92845 792 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 GLT8D2Q9H1C3 349 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 SUDS3Q9H7L9 328 aaPredicted RBP18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 DLGAP2Q9P1A6 1054 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 ZNF232Q9UNY5 417 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 FLOT1O75955 427 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 NPEPPSP55786 919 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 KLC1Q07866 573 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 DRAP1Q14919 205 aaPredicted RBP18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 FRMD5Q7Z6J6 570 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 PHLDB2Q86SQ0 1253 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 LNX1Q8TBB1 728 aaPredicted RBP18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 GLG1Q92896 1179 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 IFT74Q96LB3 600 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 NAP1L4Q99733 375 aaKnown RBP18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 CBWD1Q9BRT8 395 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 AZI2Q9H6S1 392 aa18.51■□□□□ 0.55
LDLRAP1-201ENST00000374338 CNTNAP1P78357 1384 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 K7ENM7 598 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 PLSCR1O15162 318 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 ENTPD3O75355 529 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 WFS1O76024 890 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 MMP13P45452 471 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 GCLMP48507 274 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 PRELPP51888 382 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 CPNE8Q86YQ8 564 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 SCFD2Q8WU76 684 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 SLC20A1Q8WUM9 679 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 POP1Q99575 1024 aaKnown RBP18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 DNAAF2Q9NVR5 837 aaKnown RBP18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 ARHGEF35A5YM69 484 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 BHMG1C9JSJ3 638 aaPredicted RBP18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 ATMINO43313 823 aaPredicted RBP18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 LGR5O75473 907 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 CYP3A4P08684 503 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 CIITAP33076 1130 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 RNASELQ05823 741 aaKnown RBP18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 DYNC1I2Q13409 638 aaKnown RBP18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 OR52E8Q6IFG1 317 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 DEFB132Q7Z7B7 95 aa18.5■□□□□ 0.55
LDLRAP1-201ENST00000374338 DAW1Q8N136 415 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms