RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 M0R2N6 131 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 PPIP5K2O43314 1243 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 RFC5P40937 340 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 KRT17Q04695 432 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 MPP3Q13368 585 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 CBWD6Q4V339 395 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 ARSHQ5FYA8 562 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 CBWD3Q5JTY5 395 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 CBWD5Q5RIA9 395 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 TMEM179Q6ZVK1 233 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 DDX27Q96GQ7 796 aaKnown RBP12.9□□□□□ -0.34
NCDN-202ENST00000373243 FAM84AQ96KN4 292 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.9□□□□□ -0.34
NCDN-202ENST00000373243 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
NCDN-202ENST00000373243 PODXLO00592 558 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 PRELPP51888 382 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 KCNJ2P63252 427 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 VPS72Q15906 364 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 LIN9Q5TKA1 542 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 CROCCP2Q86T23 111 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 SLC17A8Q8NDX2 589 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 POP1Q99575 1024 aaKnown RBP12.9□□□□□ -0.34
NCDN-202ENST00000373243 CBWD1Q9BRT8 395 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 VCXQ9H320 206 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
NCDN-202ENST00000373243 APBA3O96018 575 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 CA4P22748 312 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 CHRNA3P32297 505 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 ECE1P42892 770 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 BFSP1Q12934 665 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 RPS6KC1Q96S38 1066 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 PITPNM3Q9BZ71 974 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 WDR11Q9BZH6 1224 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 GPRC5CQ9NQ84 441 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.35
NCDN-202ENST00000373243 EXOC1LA0A1B0GW35 172 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 TMEM120BA0PK00 339 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 CCT8L1PA6NM43 557 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 FOXO6A8MYZ6 492 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 RASA4BC9J798 803 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 RASA4O43374 803 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 SGPL1O95470 568 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 TMEM253P0C7T8 217 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 SHMT1P34896 483 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 MAPK7Q13164 816 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 DLGAP5Q15398 846 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PPP1R14CQ8TAE6 165 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 CPA5Q8WXQ8 436 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PABPC3Q9H361 631 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 ECT2Q9H8V3 914 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 ALG13Q9NP73 1137 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PITPNM2Q9BZ72 1349 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 MIF4GDA9UHW6 222 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 CD58P19256 250 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 EPHA7Q15375 998 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 SYCP2LQ5T4T6 812 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 ETNK1Q9HBU6 452 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 SLC5A4Q9NY91 659 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 EXOC7Q9UPT5 735 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 ABL2P42684 1182 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 NPEPPSP55786 919 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PRKG1Q13976 671 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 AGBL2Q5U5Z8 902 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 C6orf89Q6UWU4 347 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 PALB2Q86YC2 1186 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 RBM12BQ8IXT5 1001 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 DCAF4Q8WV16 495 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 GBP5Q96PP8 586 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
NCDN-202ENST00000373243 KCTD10Q9H3F6 313 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
NCDN-202ENST00000373243 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 FAM187AA6NFU0 413 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 LRRIQ4A6NIV6 560 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 SLC12A3P55017 1021 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 MUM1Q2TAK8 710 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 Q4G0T1 1027 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 CEP55Q53EZ4 464 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 KMT5AQ9NQR1 393 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 DCTN4Q9UJW0 460 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 INTUQ9ULD6 942 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 PCDHB4Q9Y5E5 795 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
NCDN-202ENST00000373243 HNRNPCP07910 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
NCDN-202ENST00000373243 LIG4P49917 911 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms