RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 COPB2P35606 906 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 STAT2P52630 851 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 RIPK1Q13546 671 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 ITIH4Q14624 930 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 LRCH2Q5VUJ6 765 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 ADAT2Q7Z6V5 191 aaKnown RBP15.81■□□□□ 0.12
PRKN-204ENST00000366896 ANKS4BQ8N8V4 417 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 SLC10A4Q96EP9 437 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 STRA6Q9BX79 667 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 INTS2Q9H0H0 1204 aaKnown RBP15.81■□□□□ 0.12
PRKN-204ENST00000366896 FRMD4BQ9Y2L6 1034 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 GBP2P32456 591 aaPredicted RBP15.81■□□□□ 0.12
PRKN-204ENST00000366896 SATB1Q01826 763 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 DHX34Q14147 1143 aaKnown RBP15.81■□□□□ 0.12
PRKN-204ENST00000366896 ACCSLQ4AC99 568 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 PIGWQ7Z7B1 504 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 RHOT2Q8IXI1 618 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 NACC1Q96RE7 527 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 TRIM31Q9BZY9 425 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 AGPAT3Q9NRZ7 376 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 BAIAP2L1Q9UHR4 511 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 PNMA2Q9UL42 364 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 KCNH4Q9UQ05 1017 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 LOC285556D6RIA3 1793 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
PRKN-204ENST00000366896 PFASO15067 1338 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 P4HA2O15460 535 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 CAND2O75155 1236 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 CFBP00751 764 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 YY1P25490 414 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 GJA5P36382 358 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 HOOK3Q86VS8 718 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 CCDC63Q8NA47 563 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 ATP8B4Q8TF62 1192 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
PRKN-204ENST00000366896 RPAP3Q9H6T3 665 aaPredicted RBP15.8■□□□□ 0.12
PRKN-204ENST00000366896 TMOD4Q9NZQ9 345 aa15.8■□□□□ 0.12
PRKN-204ENST00000366896 A0A0G2JLL6 359 aaPredicted RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 GOLGA6L10A0A0M3HER8 536 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 CXCL11O14625 94 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 RPSAP08865 295 aaKnown RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 GBP1P32455 592 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 ARHGAP44Q17R89 818 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 DUPD1Q68J44 220 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 PRRT2Q7Z6L0 340 aaPredicted RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 FAM160B2Q86V87 743 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 CHURC1Q8WUH1 139 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 ATXN2LQ8WWM7 1075 aaKnown RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 RSRC1Q96IZ7 334 aaKnown RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 WDR11Q9BZH6 1224 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 THAP2Q9H0W7 228 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 SEPT11Q9NVA2 429 aaKnown RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 COG5Q9UP83 839 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 PARP14Q460N5 1801 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 MIF4GDA9UHW6 222 aaKnown RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 LRRN2O75325 713 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 TOMM70O94826 608 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 NUDT17P0C025 328 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 CHN1P15882 459 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 MMP13P45452 471 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 PRPF4BQ13523 1007 aaKnown RBP15.79■□□□□ 0.12
PRKN-204ENST00000366896 C11orf63Q6NUN7 778 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 B3GNT9Q6UX72 402 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 FAM178BQ8IXR5 827 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 TBC1D31Q96DN5 1066 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 FMO2Q99518 471 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 ATP8A1Q9Y2Q0 1164 aa15.79■□□□□ 0.12
PRKN-204ENST00000366896 PPP1R12AO14974 1030 aaPredicted RBP15.78■□□□□ 0.12
PRKN-204ENST00000366896 NEBLO76041 1014 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 ECM2O94769 699 aaPredicted RBP15.78■□□□□ 0.12
PRKN-204ENST00000366896 MMEP08473 750 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 MAPTP10636 758 aaKnown RBP15.78■□□□□ 0.12
PRKN-204ENST00000366896 MCCD1P59942 119 aaPredicted RBP15.78■□□□□ 0.12
PRKN-204ENST00000366896 MYL7Q01449 175 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 NEK9Q8TD19 979 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 ERP44Q9BS26 406 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 EPB41L4BQ9H329 900 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 EHMT1Q9H9B1 1298 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 USP20Q9Y2K6 914 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 CFAP73A6NFT4 308 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 PMM2O15305 246 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 TNFAIP3P21580 790 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 BFSP1Q12934 665 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 ALCAMQ13740 583 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 NAA25Q14CX7 972 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 PHLDB3Q6NSJ2 640 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 CCDC174Q6PII3 467 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 CROCCP2Q86T23 111 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 RDH13Q8NBN7 331 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 ZNF784Q8NCA9 323 aaPredicted RBP15.78■□□□□ 0.12
PRKN-204ENST00000366896 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 CCHCR1Q8TD31 782 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 MORC4Q8TE76 937 aa15.78■□□□□ 0.12
PRKN-204ENST00000366896 SLC20A1Q8WUM9 679 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms