RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 STRA6Q9BX79 667 aa20.92■□□□□ 0.94
HLA-DRB1-201ENST00000360004 SEMA6BQ9H3T3 888 aa20.92■□□□□ 0.94
HLA-DRB1-201ENST00000360004 LMBRD1Q9NUN5 540 aa20.92■□□□□ 0.94
HLA-DRB1-201ENST00000360004 TBC1D13Q9NVG8 400 aa20.92■□□□□ 0.94
HLA-DRB1-201ENST00000360004 AGO2Q9UKV8 859 aaKnown RBP20.92■□□□□ 0.94
HLA-DRB1-201ENST00000360004 TISP43B9A030 160 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 RHOBTB3O94955 611 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 CLTAP09496 248 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 EHHADHQ08426 723 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 STK4Q13043 487 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 CAMK4Q16566 473 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 EPC2Q52LR7 807 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 SEZ6Q53EL9 994 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 ZNF507Q8TCN5 953 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 ERCC4Q92889 916 aaPredicted RBP20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 FAM212AQ96EL1 285 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 GSDMAQ96QA5 445 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 GAS2L1Q99501 681 aaPredicted RBP20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 TTYH1Q9H313 450 aaPredicted RBP20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 PRDM12Q9H4Q4 367 aa20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 RPF1Q9H9Y2 349 aaKnown RBP20.91■□□□□ 0.94
HLA-DRB1-201ENST00000360004 ZMYM2Q9UBW7 1377 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 A0A0B4J269 797 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 BMPR1AP36894 532 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 ALDH7A1P49419 539 aaKnown RBP20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 GRIK3Q13003 919 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 EPM2AIP1Q7L775 607 aaPredicted RBP20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 ELOA2Q8IYF1 753 aaPredicted RBP20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 SCFD1Q8WVM8 642 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 C11orf84Q9BUA3 381 aaPredicted RBP20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 GTPBP4Q9BZE4 634 aaKnown RBP20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 IKZF4Q9H2S9 585 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 HCSTQ9UBK5 93 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 PCDHA5Q9Y5H7 936 aa20.9■□□□□ 0.94
HLA-DRB1-201ENST00000360004 COL4A6Q14031 1691 aa20.89■□□□□ 0.94
HLA-DRB1-201ENST00000360004 CARNS1A5YM72 827 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 ABLIM1O14639 778 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 LDHAP00338 332 aaKnown RBP20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 THP07101 528 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GARTP22102 1010 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 PPP2R3AQ06190 1150 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GRIN2CQ14957 1233 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 KNOP1Q1ED39 458 aaKnown RBP20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SLC39A4Q6P5W5 647 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 COLGALT1Q8NBJ5 622 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 KIAA0895Q8NCT3 520 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GOLGA5Q8TBA6 731 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CLP1Q92989 425 aaKnown RBP20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 PCIF1Q9H4Z3 704 aa20.89■□□□□ 0.93
HLA-DRB1-201ENST00000360004 RB1P06400 928 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CXCL8P10145 99 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 PPM1AP35813 382 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 OR1G1P47890 313 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 ACOT2P49753 483 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GPM6BQ13491 265 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 STIM1Q13586 685 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 HSP90AA2PQ14568 343 aaPredicted RBP20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GLRA4Q5JXX5 417 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 KCNT2Q6UVM3 1135 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 LRRC55Q6ZSA7 311 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SPRED2Q7Z698 418 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GDPD5Q8WTR4 605 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SAAL1Q96ER3 474 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 FAM213AQ9BRX8 229 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 PLVAPQ9BX97 442 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 HAPLN2Q9GZV7 340 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 NUP62CLQ9H1M0 184 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CWH43Q9H720 699 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 MAPK8IP1Q9UQF2 711 aa20.88■□□□□ 0.93
HLA-DRB1-201ENST00000360004 KIAA0391O15091 583 aaKnown RBP20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CSPG5O95196 566 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 MBD3O95983 291 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 IGFBP4P22692 258 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 TNFSF9P41273 254 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 AFF1P51825 1210 aaKnown RBP20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 BCAR1P56945 870 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SNRPFP62306 86 aaKnown RBP20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 KRT17Q04695 432 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 BMT2Q1RMZ1 405 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 ISM2Q6H9L7 571 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SNX27Q96L92 541 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CBWD1Q9BRT8 395 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 NRDE2Q9H7Z3 1164 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SLC38A7Q9NVC3 462 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 SPG21Q9NZD8 308 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CGNQ9P2M7 1197 aaKnown RBP20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 FAN1Q9Y2M0 1017 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 STYXL1Q9Y6J8 313 aa20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 FNDC1Q4ZHG4 1894 aaPredicted RBP20.87■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GOLGA8IPA6NC78 632 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 GOLGA8JA6NMD2 632 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 RFXAPO00287 272 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 BIN1O00499 593 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CLIC2O15247 247 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CALUO43852 315 aaPredicted RBP20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 ALDH2P05091 517 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 PBX3P40426 434 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 CYP2J2P51589 502 aa20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 ZNF658Q5TYW1 1059 aaPredicted RBP20.86■□□□□ 0.93
HLA-DRB1-201ENST00000360004 ZNF280BQ86YH2 543 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms