RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 WFS1O76024 890 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 PDE5AO76074 875 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 S100A1P23297 94 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CIITAP33076 1130 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CTCFP49711 727 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CYP2J2P51589 502 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 MESDQ14696 234 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 R3HDM1Q15032 1099 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 PRR23BQ6ZRT6 265 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 TRIM67Q6ZTA4 783 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CHST3Q7LGC8 479 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 GPR141Q7Z602 305 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF473Q8WTR7 871 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 DPH5Q9H2P9 285 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 A0A087WXM4 84 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 VWA5AO00534 786 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 BRAFP15056 766 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 GPTP24298 496 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 PFKFB3Q16875 520 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KRT73Q86Y46 540 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 POMGNT1Q8WZA1 660 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KIF17Q9P2E2 1029 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 MAGI3Q5TCQ9 1506 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 NLRP1Q9C000 1473 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 FAM208BQ5VWN6 2430 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CAPN9O14815 690 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ADD1P35611 737 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KRT20P35900 424 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 IL6STP40189 918 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ITGA9Q13797 1035 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 RSRC2Q7L4I2 434 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 FANCEQ9HB96 536 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KRT82Q9NSB4 513 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ZMYM2Q9UBW7 1377 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 HGSO14964 777 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 LPXNO60711 386 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 GDF11O95390 407 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 STIP1P31948 543 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 GTF2H1P32780 548 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ADCK5Q3MIX3 580 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 BBS9Q3SYG4 887 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CCDC137Q6PK04 289 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CPDO75976 1380 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CDHR2Q9BYE9 1310 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KRT6AP02538 564 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KRT6BP04259 564 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KRT6CP48668 564 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 HP1BP3Q5SSJ5 553 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 LINC00523Q86TU6 105 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 C15orf41Q9Y2V0 281 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 PPME1Q9Y570 386 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CHMP2AO43633 222 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 RARGP13631 454 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 SKOR1P84550 965 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 FAM160B2Q86V87 743 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 LRRC6Q86X45 466 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 TRIM9Q9C026 710 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 DKK3Q9UBP4 350 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ZDHHC9Q9Y397 364 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 CHD4Q14839 1912 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 GSNP06396 782 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ADD2P35612 726 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 DARS2Q6PI48 645 aaKnown RBP6.93□□□□□ -1.3
VPS13B-202ENST00000357162 HDAC7Q8WUI4 952 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ERP27Q96DN0 273 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 RBBP8Q99708 897 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
VPS13B-202ENST00000357162 ALOX5P09917 674 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 USP38Q8NB14 1042 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ESYT2A0FGR8 921 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 STX7O15400 261 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ZC3H11AO75152 810 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 HMOX2P30519 316 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ACADVLP49748 655 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 C11orf63Q6NUN7 778 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PCNX1Q96RV3 2341 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 FBXL5Q9UKA1 691 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 HNRNPCL2B2RXH8 293 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 KPNA4O00629 521 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 POLR2EP19388 210 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TP53BP2Q13625 1128 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 THOC5Q13769 683 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PPP4R4Q6NUP7 873 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 FAM161BQ96MY7 647 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SAMSN1Q9NSI8 373 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ZC3H13Q5T200 1668 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 MFSD4BQ5TF39 518 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TRPC7Q9HCX4 862 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TLR7Q9NYK1 1049 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 STARD13Q9Y3M8 1113 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 VPS4BO75351 444 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ATP1A3P13637 1013 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PSMA2P25787 234 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 MCL1Q07820 350 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms